RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TBCELQ5QJ74 424 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 TMC5Q6UXY8 1006 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 ANKRD46Q86W74 232 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SLC22A15Q8IZD6 547 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HIST1H2AHQ96KK5 128 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 HIST1H2AJQ99878 128 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 H2AFJQ9BTM1 129 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 WRAP53Q9BUR4 548 aaKnown RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 IGFLR1Q9H665 355 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 NLE1Q9NVX2 485 aaPredicted RBP9.2□□□□□ -0.94
PRDM9-201ENST00000296682 SLAMF8Q9P0V8 285 aa9.2□□□□□ -0.94
PRDM9-201ENST00000296682 PRORSD1PA6NEY8 169 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 HIDE1A8MVS5 230 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 GNGT2O14610 69 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PAPSS2O95340 614 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CLTBP09497 229 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 COL6A1P12109 1028 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 VCLP18206 1134 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 FDXRP22570 491 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 HALP42357 657 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 WASP42768 502 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TEAD2Q15562 447 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TGFBIQ15582 683 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 AP5B1Q2VPB7 878 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 AARS2Q5JTZ9 985 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 SYVN1Q86TM6 617 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PGAM4Q8N0Y7 254 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TEX26Q8N6G2 289 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CHST14Q8NCH0 376 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CYGBQ8WWM9 190 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 FUBP1Q96AE4 644 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 VPS50Q96JG6 964 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TMEM175Q9BSA9 504 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 EFHD1Q9BUP0 239 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 KLF16Q9BXK1 252 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 RETREG1Q9H6L5 497 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CWH43Q9H720 699 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 SPAG4Q9NPE6 437 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 POLR3HQ9Y535 204 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 MAGEA13PA6NCF6 341 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PARNO95453 639 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ALDOCP09972 364 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ILF2Q12905 390 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 BLMHQ13867 455 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CRY1Q16526 586 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PGS1Q32NB8 556 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 THEMIS2Q5TEJ8 643 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 DPY19L3Q6ZPD9 716 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ZBTB49Q6ZSB9 765 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CANT1Q8WVQ1 401 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TOP1MTQ969P6 601 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 NMD3Q96D46 503 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CCDC28BQ9BUN5 200 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 SLC46A2Q9BY10 475 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 BATF3Q9NR55 127 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 CACNA2D2Q9NY47 1150 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 POLG2Q9UHN1 485 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PRSS21Q9Y6M0 314 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 LEFTY2O00292 366 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TLL1O43897 1013 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TBC1D4O60343 1298 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 RNASEH1O60930 286 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 GLUD1P00367 558 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 EPOP01588 193 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 LYNP07948 512 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 MTPNP58546 118 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 GK3PQ14409 553 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ZIK1Q3SY52 487 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 C5orf22Q49AR2 442 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 DGKKQ5KSL6 1271 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 LRRC66Q68CR7 880 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 PGM2L1Q6PCE3 622 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ST13P4Q8IZP2 240 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 RNF145Q96MT1 663 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TSSK3Q96PN8 268 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 RANBP9Q96S59 729 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TMEM106CQ9BVX2 250 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 FARSBQ9NSD9 589 aaKnown RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 OPTCQ9UBM4 332 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 USP22Q9UPT9 525 aa9.19□□□□□ -0.94
PRDM9-201ENST00000296682 ARIH1Q9Y4X5 557 aaPredicted RBP9.19□□□□□ -0.94
PRDM9-201ENST00000296682 TRIM38O00635 465 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 RAD51BO15315 384 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CCNHP51946 323 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PLEKHG6Q3KR16 790 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CNKSR3Q6P9H4 555 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 RNF111Q6ZNA4 994 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 Q6ZVL8 140 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 GRASPQ7Z6J2 395 aaPredicted RBP9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CRIPAKQ8N1N5 446 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 TRIML2Q8N7C3 387 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 FAM110BQ8TC76 370 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 FIG4Q92562 907 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 JADE3Q92613 823 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 KIAA1191Q96A73 305 aa9.18□□□□□ -0.94
PRDM9-201ENST00000296682 CFHR5Q9BXR6 569 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms