RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ACOX2Q99424 681 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 FBRSL1Q9HCM7 1045 aaKnown RBP15.37■□□□□ 0.05
LSM6-201ENST00000296581 CYP4F12Q9HCS2 524 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 PRSS16Q9NQE7 514 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 ACSS2Q9NR19 701 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 DNAJC28Q9NX36 388 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 CD84Q9UIB8 345 aa15.37■□□□□ 0.05
LSM6-201ENST00000296581 H0Y858 1186 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 HGSO14964 777 aaPredicted RBP15.36■□□□□ 0.05
LSM6-201ENST00000296581 IMPDH1P20839 514 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 SERPINB3P29508 390 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 ETV3P41162 512 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 CCR10P46092 362 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 B4GALNT1Q00973 533 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 HENMT1Q5T8I9 393 aaKnown RBP15.36■□□□□ 0.05
LSM6-201ENST00000296581 DSG4Q86SJ6 1040 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 TRAM1L1Q8N609 369 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 EEF1AKMT1Q8WVE0 214 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 PPP1R16AQ96I34 528 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 SPATA16Q9BXB7 569 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 LATS2Q9NRM7 1088 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 C5orf42Q9H799 3197 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 CKAP5Q14008 2032 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 AREL1O15033 823 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 EPHX1P07099 455 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 GM2AP17900 193 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 MPSTP25325 297 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 SOX9P48436 509 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 ELP6Q0PNE2 266 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 NRSN1Q8IZ57 195 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 SCAMP4Q969E2 229 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 FUBP1Q96AE4 644 aaKnown RBP15.36■□□□□ 0.05
LSM6-201ENST00000296581 SARS2Q9NP81 518 aaKnown RBP15.36■□□□□ 0.05
LSM6-201ENST00000296581 CACNA2D2Q9NY47 1150 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 CD207Q9UJ71 328 aa15.36■□□□□ 0.05
LSM6-201ENST00000296581 BRWD1Q9NSI6 2320 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 COL4A2P08572 1712 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 CDC7O00311 574 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 SLC25A14O95258 325 aaPredicted RBP15.35■□□□□ 0.05
LSM6-201ENST00000296581 ELFN1P0C7U0 828 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 RPL14P50914 215 aaKnown RBP15.35■□□□□ 0.05
LSM6-201ENST00000296581 GALK1P51570 392 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 GALNT1Q10472 559 aaPredicted RBP15.35■□□□□ 0.05
LSM6-201ENST00000296581 TUBB3Q13509 450 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 TSNQ15631 228 aaKnown RBP15.35■□□□□ 0.05
LSM6-201ENST00000296581 CFAP157Q5JU67 520 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 GPRC6AQ5T6X5 926 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 FBXL19Q6PCT2 694 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 CLNKQ7Z7G1 428 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 PHF21BQ96EK2 531 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 COQ10AQ96MF6 247 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 EBF4Q9BQW3 602 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 ZSCAN5AQ9BUG6 496 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 KLHL42Q9P2K6 505 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 ZFP69BQ9UJL9 534 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 RNF112Q9ULX5 631 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 ITM2BQ9Y287 266 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 STON1Q9Y6Q2 735 aa15.35■□□□□ 0.05
LSM6-201ENST00000296581 A0A1B0GVG6 124 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 NPEPPSL1A6NEC2 478 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 SYCE1LA8MT33 242 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 C1QTNF3-AMACRE9PGA6 284 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 UBXN8O00124 270 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 BTN3A1O00481 513 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 NPC1O15118 1278 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 KLK8O60259 260 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ADRB3P13945 408 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 TNFRSF4P43489 277 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 HERVK_113P63132 956 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ZNF678Q5SXM1 525 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 FAM91A1Q658Y4 838 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 FRMD7Q6ZUT3 714 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 PTGR2Q8N8N7 351 aaPredicted RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 NAT14Q8WUY8 206 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 P2RY13Q9BPV8 354 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 TRMOQ9BU70 441 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 RIOK2Q9BVS4 552 aaKnown RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 ERVK-6Q9BXR3 956 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ABCG8Q9H221 673 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 GSTO2Q9H4Y5 243 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ZDHHC4Q9NPG8 344 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 MATN2O00339 956 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 TRIM16O95361 564 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 IDH3AP50213 366 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ZBTB16Q05516 673 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 CRY1Q16526 586 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 LRRC23Q53EV4 343 aaPredicted RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 ERN2Q76MJ5 926 aaKnown RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 CYP2U1Q7Z449 544 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 MMAAQ8IVH4 418 aaKnown RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 CSGALNACT1Q8TDX6 532 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 STON2Q8WXE9 905 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 PANX3Q96QZ0 392 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 HDAC8Q9BY41 377 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 ZDHHC2Q9UIJ5 367 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 TMCO1Q9UM00 188 aa15.34■□□□□ 0.05
LSM6-201ENST00000296581 TNRC18O15417 2968 aaPredicted RBP15.34■□□□□ 0.05
LSM6-201ENST00000296581 SLCO1B7G3V0H7 640 aa15.33■□□□□ 0.05
LSM6-201ENST00000296581 WNT9AO14904 365 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms