RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 KRT14P02533 472 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 GPR89BP0CG08 455 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 GRIA1P42261 906 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 VPS41P49754 854 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 INSM1Q01101 510 aaPredicted RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 KCTD19Q17RG1 926 aaPredicted RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 C14orf28Q4W4Y0 310 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CERCAMQ5T4B2 595 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC137Q6PK04 289 aaKnown RBP11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CRTC3Q6UUV7 619 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 LRRTM4Q86VH4 590 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ARL8AQ96BM9 186 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 ZIM3Q96PE6 472 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CCT8L2Q96SF2 557 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC3Q9BQI4 270 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 FAM96AQ9H5X1 160 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 SYNDIG1Q9H7V2 258 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 LRIT1Q9P2V4 623 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CLCA2Q9UQC9 943 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 KCNK6Q9Y257 313 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 SLC30A1Q9Y6M5 507 aa11.93□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC78A2IDD5 438 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 CCL22O00626 93 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 GAPDHSO14556 408 aaPredicted RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 KMOO15229 486 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 GPR39O43194 453 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 SNX2O60749 519 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 ECEL1O95672 775 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 MT-CO3P00414 261 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 MSH3P20585 1137 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 AKT1P31749 480 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF140P52738 457 aaPredicted RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 XIAPP98170 497 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 GPS1Q13098 491 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 TARDBPQ13148 414 aaKnown RBP eCLIP11.92□□□□□ -0.56e-20■■■■■ 73.3
HMGB2-201ENST00000296503 SLMAPQ14BN4 828 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 INSCQ1MX18 579 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 SKIDA1Q1XH10 827 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 KHDC1Q4VXA5 237 aaKnown RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC38Q502W7 563 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 GPRC6AQ5T6X5 926 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 TTC27Q6P3X3 843 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 Q8N9G6 341 aaPredicted RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 STYXQ8WUJ0 223 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 CCDC74AQ96AQ1 378 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 DNAJC1Q96KC8 554 aaKnown RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 CAPZA3Q96KX2 299 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 ATP6V1G3Q96LB4 118 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 ZCCHC2Q9C0B9 1178 aaKnown RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 NLE1Q9NVX2 485 aaPredicted RBP11.92□□□□□ -0.5
HMGB2-201ENST00000296503 CRLS1Q9UJA2 301 aa11.92□□□□□ -0.5
HMGB2-201ENST00000296503 PTPRBP23467 1997 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 GLB1P16278 677 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ZNF7P17097 686 aaPredicted RBP11.91□□□□□ -0.5
HMGB2-201ENST00000296503 NR1D1P20393 614 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ITGALP20701 1170 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 MC4RP32245 332 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CA5AP35218 305 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 MAZP56270 477 aaKnown RBP11.91□□□□□ -0.5
HMGB2-201ENST00000296503 C2orf54Q08AI8 447 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 LAMB3Q13751 1172 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 PLA2G4EQ3MJ16 856 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ZRANB3Q5FWF4 1079 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 TMEM220Q6QAJ8 160 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 TAS2R42Q7RTR8 314 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 TRAPPC5Q8IUR0 188 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 NAGSQ8N159 534 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ARL14Q8N4G2 192 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 PATE1Q8WXA2 126 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CDKN2AIPNLQ96HQ2 116 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SGSM3Q96HU1 749 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 C19orf43Q9BQ61 176 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 OSGEPL1Q9H4B0 414 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 BATF3Q9NR55 127 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 DNAJC16Q9Y2G8 782 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SCN8AQ9UQD0 1980 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 HEATR9A2RTY3 570 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 RHPN2P1A8MT19 583 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 PHF2O75151 1096 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ADRA1DP25100 572 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 RP1P56715 2156 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SESN2P58004 480 aaPredicted RBP11.91□□□□□ -0.5
HMGB2-201ENST00000296503 NFATC2Q13469 925 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 HLTFQ14527 1009 aaKnown RBP eCLIP11.91□□□□□ -0.55e-31■□□□□ 8.2
HMGB2-201ENST00000296503 SNCBQ16143 134 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CYP1B1Q16678 543 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CEP85LQ5SZL2 805 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SNX20Q7Z614 316 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 DDHD1Q8NEL9 900 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 GRK7Q8WTQ7 553 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 ULK4Q96C45 1275 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 DCUN1D1Q96GG9 259 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CNTNAP3BQ96NU0 1288 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 CNTNAP3Q9BZ76 1288 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SLC40A1Q9NP59 571 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 TBC1D29Q9UFV1 150 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 SLC23A2Q9UGH3 650 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 RNF215Q9Y6U7 377 aa11.91□□□□□ -0.5
HMGB2-201ENST00000296503 MROH6A6NGR9 719 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms