RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 DQX1Q8TE96 717 aaKnown RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 HOPXQ9BPY8 73 aaPredicted RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 TNKS2Q9H2K2 1166 aa13.32□□□□□ -0.28
HPS3-201ENST00000296051 POLR3HQ9Y535 204 aaPredicted RBP13.32□□□□□ -0.28
HPS3-201ENST00000296051 THRBP10828 461 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 ETV4P43268 484 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 CDK18Q07002 472 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 ABRQ12979 859 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 DGKKQ5KSL6 1271 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 NCBP2-AS2Q69YL0 99 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 FAM45BPQ6NSW5 357 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 H2AFY2Q9P0M6 372 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 CDC14AQ9UNH5 594 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 ST14Q9Y5Y6 855 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 TTC24A2A3L6 582 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 ANKDD1BA6NHY2 528 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 E7ESA3 106 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 H0Y858 1186 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 IDH3BO43837 385 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 SNAI1O95863 264 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 AHSGP02765 367 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 KELP23276 732 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 ALDH6A1Q02252 535 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 TRIM32Q13049 653 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 TRIP4Q15650 581 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 BRMS1LQ5PSV4 323 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 ASB9Q96DX5 294 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 REXO5Q96IC2 774 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 TEPSINQ96N21 525 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 TSPAN18Q96SJ8 248 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 REEP1Q9H902 201 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 A0A0U1RQF3 1178 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 PNMA8CA0A1B0GUJ8 204 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 CLDN25C9JDP6 229 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 CDK14O94921 469 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 SLC1A2P43004 574 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 ANXA11P50995 505 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 KLHL35Q6PF15 583 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 PNPT1Q8TCS8 783 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 BADQ92934 168 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 TSSK3Q96PN8 268 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 DPEP2Q9H4A9 486 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 CNTN6Q9UQ52 1028 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 SAMHD1Q9Y3Z3 626 aaKnown RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 EFCAB10A6NFE3 127 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 YJEFN3A6XGL0 299 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 H3BN98 237 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 GSTM1P09488 218 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 IDO1P14902 403 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 FAM151BQ6UXP7 276 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 GPRIN3Q6ZVF9 776 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 COPS8Q99627 209 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 C20orf27Q9GZN8 174 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 IFT80Q9P2H3 777 aaPredicted RBP13.31□□□□□ -0.28
HPS3-201ENST00000296051 SLC2A6Q9UGQ3 507 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 NENFQ9UMX5 172 aa13.31□□□□□ -0.28
HPS3-201ENST00000296051 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 TBX1O43435 398 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 AZGP1P25311 298 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 IL12AP29459 219 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 DGKGP49619 791 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 MS4A2Q01362 244 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 RHDQ02161 417 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 RABL3Q5HYI8 236 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 AMER2Q8N7J2 671 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 POF1BQ8WVV4 589 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 HMGB4Q8WW32 186 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 SNX27Q96L92 541 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 TMEM74Q96NL1 305 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 BBS4Q96RK4 519 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 FAM47E-STBD1D6RA91 191 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 MAPK1P28482 360 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 CCR4P51679 360 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 STK40Q8N2I9 435 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 OR7D4Q8NG98 312 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 SCAMP5Q8TAC9 235 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 FAR1Q8WVX9 515 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 KLK6Q92876 244 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.3□□□□□ -0.28
HPS3-201ENST00000296051 COL14A1Q05707 1796 aaKnown RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 DPYSL2Q16555 572 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 UBE2J2Q8N2K1 259 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 FAM45AQ8TCE6 357 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 SELENOMQ8WWX9 145 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 PROX1Q92786 737 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 GKN1Q9NS71 199 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 C5P01031 1676 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 A0A0J9YVX5 310 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 HTRA2O43464 458 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 BCAS2O75934 225 aaPredicted RBP13.3□□□□□ -0.28
HPS3-201ENST00000296051 ANGPTL1O95841 491 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 TACR2P21452 398 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 KCNA5P22460 613 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 CAPGP40121 348 aa13.3□□□□□ -0.28
HPS3-201ENST00000296051 PITX1P78337 314 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms