RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 IL23AQ9NPF7 189 aa13.83□□□□□ -0.2
NXF1-201ENST00000294172 CROTQ9UKG9 612 aa13.83□□□□□ -0.2
NXF1-201ENST00000294172 ACOT8O14734 319 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 BCAS2O75934 225 aaPredicted RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 OR4F21O95013 312 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 UROSP10746 265 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 SPAM1P38567 509 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 GRAMD1BQ3KR37 738 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 LRRC66Q68CR7 880 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 ASTLQ6HA08 431 aaPredicted RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 IRGCQ6NXR0 463 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 C22orf39Q6P5X5 142 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 CRTC1Q6UUV9 634 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 GRIN3AQ8TCU5 1115 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 APOL5Q9BWW9 433 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 BBS2Q9BXC9 721 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 VCX3BQ9H321 246 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 NOL11Q9H8H0 719 aaKnown RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 NUDT4Q9NZJ9 180 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 CXXC1Q9P0U4 656 aaPredicted RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 SLCO3A1Q9UIG8 710 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 PSMD13Q9UNM6 376 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 CDH23Q9H251 3354 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 KIAA1671Q9BY89 1806 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 S100BP04271 92 aaPredicted RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 CHRM1P11229 460 aaPredicted RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 SFT2D3Q587I9 215 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 GRAMD4Q6IC98 578 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 SBSNQ6UWP8 590 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 ADAMTSL2Q86TH1 951 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 RETREG3Q86VR2 466 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 MYO1HQ8N1T3 1032 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 PQLC1Q8N2U9 271 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 GPR26Q8NDV2 337 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 MYLIPQ8WY64 445 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 PDLIM5Q96HC4 596 aaKnown RBP13.82□□□□□ -0.2
NXF1-201ENST00000294172 LMLNQ96KR4 655 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 SLC25A13Q9UJS0 675 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 TMCO1Q9UM00 188 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
NXF1-201ENST00000294172 PRORSD1PA6NEY8 169 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 ANGPT2O15123 496 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 GRM6O15303 877 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 VPS4BO75351 444 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 FGBP02675 491 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 UGT2B4P06133 528 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 RPS3P23396 243 aaKnown RBP eCLIP13.81□□□□□ -0.2
NXF1-201ENST00000294172 RGS4P49798 205 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 CCNHP51946 323 aaPredicted RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 HTRA4P83105 476 aaPredicted RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 TRIM25Q14258 630 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 DPY19L3Q6ZPD9 716 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 NECAB2Q7Z6G3 386 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 PDSS2Q86YH6 399 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 PCYOX1LQ8NBM8 494 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 CLP1Q92989 425 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 ATP6V1E2Q96A05 226 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 ASB9Q96DX5 294 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 LRCH3Q96II8 777 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 LRGUKQ96M69 825 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 KLHL32Q96NJ5 620 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 LINC00597Q9H2U6 94 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 SUV39H2Q9H5I1 410 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 NSUN3Q9H649 340 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 COPS7BQ9H9Q2 264 aaPredicted RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 SARDHQ9UL12 918 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 HS3ST2Q9Y278 367 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 DENND4CQ5VZ89 1909 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 FFAR2O15552 330 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 KATNA1O75449 491 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 LINGO3P0C6S8 592 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 IDO1P14902 403 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 CAPN3P20807 821 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 CTNNB1P35222 781 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 SLC7A2P52569 658 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 AQP4P55087 323 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 ERVPABLB-1P60509 514 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 NAA20P61599 178 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 RFLNAQ6ZTI6 216 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 Q6ZVU0 165 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 USP45Q70EL2 814 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 NXPE1Q8N323 547 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 MRPL43Q8N983 215 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 SCRN2Q96FV2 425 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 HBEGFQ99075 208 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 C1orf50Q9BV19 199 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 NUSAP1Q9BXS6 441 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 MRPL40Q9NQ50 206 aaKnown RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 SDR39U1Q9NRG7 319 aaPredicted RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 C6orf203Q9P0P8 240 aaPredicted RBP13.81□□□□□ -0.2
NXF1-201ENST00000294172 DLGAP2Q9P1A6 1054 aa13.81□□□□□ -0.2
NXF1-201ENST00000294172 TRBV5-4A0A0C4DH59 114 aa13.8□□□□□ -0.2
NXF1-201ENST00000294172 TRIM24O15164 1050 aa13.8□□□□□ -0.2
NXF1-201ENST00000294172 RAD51BO15315 384 aa13.8□□□□□ -0.2
NXF1-201ENST00000294172 UBTFL6P0CB48 400 aaPredicted RBP13.8□□□□□ -0.2
NXF1-201ENST00000294172 DGKAP23743 735 aa13.8□□□□□ -0.2
NXF1-201ENST00000294172 PTSQ03393 145 aa13.8□□□□□ -0.2
NXF1-201ENST00000294172 CARD16Q5EG05 197 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms