RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 PRICKLE1Q96MT3 831 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 DENND2DQ9H6A0 471 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 CCDC177Q9NQR7 707 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 HMGXB4Q9UGU5 601 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 GTPBP1O00178 669 aaKnown RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 CBFA2T3O75081 653 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 ANXA4P09525 319 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 DBTP11182 482 aaKnown RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 COL6A1P12109 1028 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 SRSF11Q05519 484 aaKnown RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 NAT16Q8N8M0 369 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 KLRG2A4D1S0 409 aaPredicted RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 KERAO60938 352 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 TMEM63AO94886 807 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 RCVRNP35243 200 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 HSPA7P48741 367 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 NAE1Q13564 534 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 GPR33Q49SQ1 333 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 DENND5AQ6IQ26 1287 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 ARL10Q8N8L6 244 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 WFIKKN2Q8TEU8 576 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 MFSD1Q9H3U5 465 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 TIMMDC1Q9NPL8 285 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
PTCD1-201ENST00000292478 GDAP2Q9NXN4 497 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 CALML5Q9NZT1 146 aa12.67□□□□□ -0.38
PTCD1-201ENST00000292478 FAM86C2PA6NEL3 165 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CCDC182A6NF36 153 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 C2orf71A6NGG8 1288 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 C2orf80Q0P641 193 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TEAD4Q15561 434 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 C9orf64Q5T6V5 341 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 FBXO22Q8NEZ5 403 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PNPT1Q8TCS8 783 aaKnown RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ARHGEF3Q9NR81 526 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 RAB23Q9ULC3 237 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PCDHGA4Q9Y5G9 962 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3DA0A087WVF3 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3IA0A087WXS9 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3EA0A087X179 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3KA0A087X1G2 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3FA6NER0 549 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3LB9A6J9 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ADAMDEC1O15204 470 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3HP0C7X1 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 KCNE1P15382 129 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CCNFP41002 786 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ATP12AP54707 1039 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TAS2R39P59534 338 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ACTR3P61158 418 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SLC9A5Q14940 896 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TIGD5Q53EQ6 642 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CCDC157Q569K6 752 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 NCBP2-AS2Q69YL0 99 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3GQ6DHY5 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CLEC6AQ6EIG7 209 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3CQ6IPX1 549 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SLC30A8Q8IWU4 369 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 IZUMO1Q8IYV9 350 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TBC1D3Q8IZP1 549 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PIH1D2Q8WWB5 315 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SMG7Q92540 1137 aaKnown RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SUSD3Q96L08 255 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CADM1Q9BY67 442 aaKnown RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TLE6Q9H808 572 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TOR4AQ9NXH8 423 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PDP1Q9P0J1 537 aaPredicted RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SEC14L3Q9UDX4 400 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CAPN8A6NHC0 703 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ZNF487B1APH4 448 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 BCKDKO14874 412 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 HAT1O14929 419 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CHST10O43529 356 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SLC1A2P43004 574 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 RPS9P46781 194 aaKnown RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 GAD2Q05329 585 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 RALGDSQ12967 914 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 NDUFA9Q16795 377 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 VWA5B1Q5TIE3 1220 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 BEND5Q7L4P6 421 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 SNX20Q7Z614 316 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 C10orf82Q8WW14 230 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 ACDQ96AP0 544 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 OSBPL7Q9BZF2 842 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 NMUR1Q9HB89 426 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 C1orf109Q9NX04 203 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PCDHGC4Q9Y5F7 938 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 LRRC14BA6NHZ5 514 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 METTL18O95568 372 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 IL12AP29459 219 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CMPK1P30085 196 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CTSKP43235 329 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CAP1Q01518 475 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 QPRTQ15274 297 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 RNF44Q7L0R7 432 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
PTCD1-201ENST00000292478 CYP4X1Q8N118 509 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 TMEM175Q9BSA9 504 aa12.66□□□□□ -0.38
PTCD1-201ENST00000292478 FKBPLQ9UIM3 349 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms