RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CHSY3Q70JA7 882 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 PELI3Q8N2H9 469 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 STK40Q8N2I9 435 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 CBARPQ8N350 705 aaPredicted RBP16.63■□□□□ 0.25
CPSF4-201ENST00000292476 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 CATSPER1Q8NEC5 780 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 CYB5D2Q8WUJ1 264 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 CCDC124Q96CT7 223 aaKnown RBP16.63■□□□□ 0.25
CPSF4-201ENST00000292476 UBXN10Q96LJ8 280 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 EPS15L1Q9UBC2 864 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 IL36AQ9UHA7 158 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 SLC30A1Q9Y6M5 507 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 MYOFQ9NZM1 2061 aa16.63■□□□□ 0.25
CPSF4-201ENST00000292476 C1orf232A0A0U1RR37 186 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 AIM2O14862 343 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 AURKAO14965 403 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 NDUFS3O75489 264 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 IPO13O94829 963 aaKnown RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 WISP3O95389 354 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 UGT2B4P06133 528 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 LYNP07948 512 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CYP2A6P11509 494 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CTPS1P17812 591 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 HNF1BP35680 557 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 PSMD8P48556 350 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 PTPRNQ16849 979 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ZNF423Q2M1K9 1284 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ITPRIPL2Q3MIP1 535 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 OGFRL1Q5TC84 451 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 LYPLAL1Q5VWZ2 237 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 RNF111Q6ZNA4 994 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 C12orf40Q86WS4 652 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CCNYL1Q8N7R7 359 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 AGR3Q8TD06 166 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 MCCC1Q96RQ3 725 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CCDC68Q9H2F9 335 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 EPHX3Q9H6B9 360 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 SUDS3Q9H7L9 328 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 MEAF6Q9HAF1 191 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 POLR3BQ9NW08 1133 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 DKK3Q9UBP4 350 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ADAMTS6Q9UKP5 1117 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 VWA7Q9Y334 891 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 COMMD10Q9Y6G5 202 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ANKRD36A6QL64 1941 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 EDDM13A0A1B0GTR0 161 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 TBC1D3BA6NDS4 549 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 GOLGA8CPA6NN73 597 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 TTC34A8MYJ7 566 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 NPC1O15118 1278 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 TRIM24O15164 1050 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 PRNPP04156 253 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ALPIP09923 528 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 UQCRBP14927 111 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ZNF30P17039 623 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 GDI1P31150 447 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 GKP32189 559 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 MC4RP32245 332 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 GJA4P35212 333 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 NFKB2Q00653 900 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CACNG1Q06432 222 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 ZNF460Q14592 562 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 GAB4Q2WGN9 574 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 FNDC3BQ53EP0 1204 aaKnown RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 TCHHL1Q5QJ38 904 aaPredicted RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 CNSTQ6PJW8 725 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 LYSMD3Q7Z3D4 306 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 PQLC1Q8N2U9 271 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 POPDC3Q9HBV1 291 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 RAD18Q9NS91 495 aa16.62■□□□□ 0.25
CPSF4-201ENST00000292476 COPG1Q9Y678 874 aaKnown RBP16.62■□□□□ 0.25
CPSF4-201ENST00000292476 SLC4A1P02730 911 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 GRIA2P42262 883 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 CCR10P46092 362 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 SLC6A11P48066 632 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 ATP4BP51164 291 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 ART3Q13508 389 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 PEX6Q13608 980 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 GRM2Q14416 872 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 SQLEQ14534 574 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 PTPRCAPQ14761 206 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 HECTD2Q5U5R9 776 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 NXNQ6DKJ4 435 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 PARM1Q6UWI2 310 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 RCN3Q96D15 328 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 L3HYPDHQ96EM0 354 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 KLHL32Q96NJ5 620 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 CATSPER2Q96P56 530 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 OLFM1Q99784 485 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 KXD1Q9BQD3 176 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 WDR41Q9HAD4 459 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 MARCH4Q9P2E8 410 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-201ENST00000292476 SUN2Q9UH99 717 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 FKBPLQ9UIM3 349 aa16.61■□□□□ 0.25
CPSF4-201ENST00000292476 KIF26AQ9ULI4 1882 aaPredicted RBP16.61■□□□□ 0.25
CPSF4-201ENST00000292476 TSPAN11A1L157 253 aa16.6■□□□□ 0.25
CPSF4-201ENST00000292476 OR51F1A6NGY5 319 aa16.6■□□□□ 0.25
CPSF4-201ENST00000292476 A8MT66 165 aa16.6■□□□□ 0.25
CPSF4-201ENST00000292476 CCL22O00626 93 aa16.6■□□□□ 0.25
CPSF4-201ENST00000292476 APODP05090 189 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms