RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PTGER3P43115 390 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ARSDP51689 593 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM47EQ6ZV65 393 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 BMP8AQ7Z5Y6 402 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 DDHD1Q8NEL9 900 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 MZB1Q8WU39 189 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 BTN2A2Q8WVV5 523 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 TBATAQ96M53 351 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF778Q96MU6 729 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 FOXQ1Q9C009 403 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 MRPL46Q9H2W6 279 aaKnown RBP8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM83DQ9H4H8 585 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 IL26Q9NPH9 171 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 KLHL42Q9P2K6 505 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 DOPEY1Q5JWR5 2465 aa8.35□□□□□ -1.07
PTPDC1-201ENST00000288976 A0A1W2PP55 124 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 E2F6O75461 281 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SKAP2O75563 359 aaPredicted RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 PRAMEF1O95521 474 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 PIRTP0C851 137 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 HMOX2P30519 316 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CAPZA2P47755 286 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TPMTP51580 245 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 GPR26Q8NDV2 337 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TLCD1Q96CP7 247 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ABCG8Q9H221 673 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 EPHX3Q9H6B9 360 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 RUBCNLQ9H714 662 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CD320Q9NPF0 282 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TRBV23OR9-2A0A075B6M9 112 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 MYO1DO94832 1006 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 S1PR4O95977 384 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 APOA4P06727 396 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 AMD1P17707 334 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CD72P21854 359 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CCNFP41002 786 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CD151P48509 253 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SERPINB8P50452 374 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 METAP1P53582 386 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 GAS6Q14393 721 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 EFTUD2Q15029 972 aaKnown RBP eCLIP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ACOX1Q15067 660 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 HSP90AA5PQ58FG0 334 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ZNF470Q6ECI4 717 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM45BPQ6NSW5 357 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CES3Q6UWW8 571 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ARHGAP24Q8N264 748 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CADM4Q8NFZ8 388 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 FAM45AQ8TCE6 357 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 EPS8L3Q8TE67 593 aaKnown RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 GPR22Q99680 433 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TSSK1BQ9BXA7 367 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ZDHHC3Q9NYG2 299 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 DMTF1Q9Y222 760 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ANKRD6Q9Y2G4 727 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 KLHL33A6NCF5 533 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CXorf49A8MYA2 514 aaPredicted RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CFIP05156 583 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SNRPAP09012 282 aaKnown RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TDGF1P13385 188 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TNNI3P19429 210 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC26A3P40879 764 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CCT5P48643 541 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 POU4F1Q01851 419 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 ART3Q13508 389 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 PDE1CQ14123 709 aaPredicted RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SLC36A4Q6YBV0 504 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 CHMP1BQ7LBR1 199 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 WDR5BQ86VZ2 330 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SRRM1Q8IYB3 904 aaKnown RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 RBFAQ8N0V3 343 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 NXPE1Q8N323 547 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TP53I13Q8NBR0 393 aaPredicted RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TSPAN17Q96FV3 270 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 SMAD5Q99717 465 aaKnown RBP8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 BTBD1Q9H0C5 482 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 P2RY12Q9H244 342 aa8.34□□□□□ -1.07
PTPDC1-201ENST00000288976 TMEM221A6NGB7 291 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 MEI4A8MW99 385 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 M0R296 226 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 COPEO14579 308 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CASQ2O14958 399 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 MPOP05164 745 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CD6P30203 668 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 CENPAP49450 140 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SLC18A1P54219 525 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 SETMARQ53H47 684 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 STRA8Q7Z7C7 330 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZC3HC1Q86WB0 502 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 IFNEQ86WN2 208 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ZNF398Q8TD17 642 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 LPGAT1Q92604 370 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ATP6V1G3Q96LB4 118 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 VCXQ9H320 206 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 GNPTGQ9UJJ9 305 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 FBXO5Q9UKT4 447 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 FBXO4Q9UKT5 387 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 ANTXRLA6NF34 631 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 K7ESF4 209 aa8.33□□□□□ -1.08
PTPDC1-201ENST00000288976 LATO43561 262 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms