RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 MAPKAPK5Q8IW41 473 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 EXOC6Q8TAG9 804 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SPDL1Q96EA4 605 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 RBM18Q96H35 190 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 ATP6V1G3Q96LB4 118 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TRIM7Q9C029 511 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 ROGDIQ9GZN7 287 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TMEM117Q9H0C3 514 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 IKZF4Q9H2S9 585 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 MEAF6Q9HAF1 191 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 HAO2Q9NYQ3 351 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 NINJ2Q9NZG7 142 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 OR6C3Q9NZP0 311 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SH3BP4Q9P0V3 963 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CDH7Q9ULB5 785 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 UTYO14607 1347 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TTC21AQ8NDW8 1320 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CENPJQ9HC77 1338 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 CACNA1FO60840 1977 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 C2orf92A0A1B0GVN3 265 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SLC9B1P1A6NJY1 282 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 HS3ST1O14792 307 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 N4BP3O15049 544 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 AKAP8O43823 692 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 CELA2BP08218 269 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 UBTFL6P0CB48 400 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 GLI4P10075 376 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 GCFC2P16383 781 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 ALDH4A1P30038 563 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 IL15P40933 162 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 CLK3P49761 638 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 YBEYP58557 167 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 TPM4P67936 248 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 RAE1P78406 368 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 MRPL49Q13405 166 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 FOXP4Q8IVH2 680 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 OR14L1PQ8NHC6 308 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SOCS4Q8WXH5 440 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SEPT1Q8WYJ6 367 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 CHFRQ96EP1 664 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PTCD3Q96EY7 689 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 RPGRIP1Q96KN7 1286 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 MS4A10Q96PG2 267 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PKP2Q99959 881 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 DPYSL5Q9BPU6 564 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 PKIBQ9C010 78 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 LHPPQ9H008 270 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 FAM207AQ9NSI2 230 aaPredicted RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 ZDHHC7Q9NXF8 308 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 SPG21Q9NZD8 308 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 TRPM5Q9NZQ8 1165 aa2.74□□□□□ -1.97
CHD1-201ENST00000284049 REXO2Q9Y3B8 237 aaKnown RBP2.74□□□□□ -1.97
CHD1-201ENST00000284049 A0A087WZY1 265 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TCRBV7S3A2A0A539 114 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 A8MZ25 164 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 MITFO75030 526 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 STC2O76061 302 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KNG1P01042 644 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 GH2P01242 217 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SP9P0CG40 484 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 GNSP15586 552 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TNFRSF1AP19438 455 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 EIF2S2P20042 333 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 CD9P21926 228 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 IRX4P78413 519 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 TYSND1Q2T9J0 566 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 AASDHQ4L235 1098 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 B3GNT8Q7Z7M8 397 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 AACSQ86V21 672 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SLC22A8Q8TCC7 542 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 AKAP1Q92667 903 aaKnown RBP eCLIP2.73□□□□□ -1.97
CHD1-201ENST00000284049 EXT2Q93063 718 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 DHTKD1Q96HY7 919 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 THOC3Q96J01 351 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 KIRREL1Q96J84 757 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PARK7Q99497 189 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 C11orf84Q9BUA3 381 aaPredicted RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 TMEM231Q9H6L2 316 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 HDAC6Q9UBN7 1215 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 VAV3Q9UKW4 847 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 CLEC4AQ9UMR7 237 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 MAGEB2O15479 319 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 KRT4P19013 534 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ITGAXP20702 1163 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 AGTR2P50052 363 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 GPR143P51810 404 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ACSM1Q08AH1 577 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 ABHD18Q0P651 414 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SLC36A3Q495N2 470 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 FAM98BQ52LJ0 330 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 ZNF789Q5FWF6 425 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 LRRC8EQ6NSJ5 796 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 MTSS1LQ765P7 747 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 SYCE1Q8N0S2 351 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 MRPL43Q8N983 215 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 OR52L2PQ8NGH6 319 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 OR4A16Q8NH70 328 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 AKR7LQ8NHP1 331 aa2.73□□□□□ -1.97
CHD1-201ENST00000284049 PNPT1Q8TCS8 783 aaKnown RBP2.73□□□□□ -1.97
CHD1-201ENST00000284049 ANKRD49Q8WVL7 239 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms