RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 FAM78AQ5JUQ0 283 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SBSNQ6UWP8 590 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 RIPOR1Q6ZS17 1223 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ADAMTSL2Q86TH1 951 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SYVN1Q86TM6 617 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 MYO1HQ8N1T3 1032 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ZBTB2Q8N680 514 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 OR56A4Q8NGH8 313 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 HCAR2Q8TDS4 363 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 TWIST2Q8WVJ9 160 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ESAMQ96AP7 390 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ULK4Q96C45 1275 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 KCNA7Q96RP8 456 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 COPS8Q99627 209 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 TUBB1Q9H4B7 451 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 MTG2Q9H4K7 406 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 AKTIPQ9H8T0 292 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 EFCAB1Q9HAE3 211 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SPATS2LQ9NUQ6 558 aaKnown RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 UTP6Q9NYH9 597 aaKnown RBP9.46□□□□□ -0.89
TRIM55-201ENST00000276573 PKD2L2Q9NZM6 624 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 TMPRSS11EQ9UL52 423 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 SLC27A6Q9Y2P4 619 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 MYO7AQ13402 2215 aa9.46□□□□□ -0.89
TRIM55-201ENST00000276573 ATP6AP2A0A1C7CYW4 349 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 E2F3O00716 465 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 PIP5K1BO14986 540 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 TULP3O75386 442 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ATP6AP2O75787 350 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 KRT36O76013 467 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ESRRBO95718 433 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ADH1CP00326 375 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 CTSLP07711 333 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 GCKP35557 465 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 CCNG1P51959 295 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 B4GALNT1Q00973 533 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 TBL3Q12788 808 aaKnown RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 KCNC3Q14003 757 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 PTK2BQ14289 1009 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 PCBP2Q15366 365 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 CRY1Q16526 586 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 PREPLQ4J6C6 727 aaPredicted RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF805Q5CZA5 627 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 TCEAL5Q5H9L2 206 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 C12orf40Q86WS4 652 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 DSELQ8IZU8 1212 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 FBXW8Q8N3Y1 598 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 VN1R2Q8NFZ6 395 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 HMGCLL1Q8TB92 370 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 BPIFB1Q8TDL5 484 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 LRIG1Q96JA1 1093 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ASB16Q96NS5 453 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 FBRSL1Q9HCM7 1045 aaKnown RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ELOVL2Q9NXB9 296 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 KCTD5Q9NXV2 234 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 DKK3Q9UBP4 350 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 IL36AQ9UHA7 158 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 CDH22Q9UJ99 828 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 TSR3Q9UJK0 312 aaKnown RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 ZNF225Q9UK10 706 aa9.46□□□□□ -0.9
TRIM55-201ENST00000276573 TNPO3Q9Y5L0 923 aaKnown RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 MKI67P46013 3256 aaKnown RBP9.46□□□□□ -0.9
TRIM55-201ENST00000276573 UPK3BL1B0FP48 263 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 UPK3BL2E5RIL1 263 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 PSMD12O00232 456 aaPredicted RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 RAD51BO15315 384 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 UROSP10746 265 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 FSHRP23945 695 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 PBX2P40425 430 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 SLC6A11P48066 632 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 NUDT2P50583 147 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 CDC16Q13042 620 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 STX5Q13190 355 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 FASTKQ14296 549 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 RBBP7Q16576 425 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 TTLL9Q3SXZ7 439 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 AGKQ53H12 422 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 SWT1Q5T5J6 900 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 C1orf146Q5VVC0 180 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 C16orf89Q6UX73 402 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 GK5Q6ZS86 529 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 FRA10AC1Q70Z53 315 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 HSD11B1LQ7Z5J1 315 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 MYLK4Q86YV6 388 aaPredicted RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 NPAS3Q8IXF0 933 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 ETFBKMTQ8IXQ9 262 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 EFCAB3Q8N7B9 438 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 DTX3LQ8TDB6 740 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 SMARCD2Q92925 531 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 STMN2Q93045 179 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 RCN3Q96D15 328 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 NUSAP1Q9BXS6 441 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 LMAN2LQ9H0V9 348 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 FAM83DQ9H4H8 585 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 SFXN1Q9H9B4 322 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 PCDH12Q9NPG4 1184 aa9.45□□□□□ -0.9
TRIM55-201ENST00000276573 EIF2B4Q9UI10 523 aaKnown RBP9.45□□□□□ -0.9
TRIM55-201ENST00000276573 CD84Q9UIB8 345 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms