RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SPRP35270 261 aaPredicted RBP16.96■□□□□ 0.31
SKP2-201ENST00000274254 EIF2B5Q13144 721 aaKnown RBP16.96■□□□□ 0.31
SKP2-201ENST00000274254 DUOXA1Q1HG43 343 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 ALG11Q2TAA5 492 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 RBM20Q5T481 1227 aaKnown RBP16.96■□□□□ 0.31
SKP2-201ENST00000274254 TMEM220Q6QAJ8 160 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 RABEPKQ7Z6M1 372 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 PARGQ86W56 976 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 TDRPQ86YL5 185 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 SUMF1Q8NBK3 374 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 CEP76Q8TAP6 659 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 AARSD1Q9BTE6 412 aaKnown RBP16.96■□□□□ 0.31
SKP2-201ENST00000274254 TMEM109Q9BVC6 243 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 EURLQ9NYK6 297 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 KLQ9UEF7 1012 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 SUFUQ9UMX1 484 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 MED16Q9Y2X0 877 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 IKBKGQ9Y6K9 419 aa16.96■□□□□ 0.31
SKP2-201ENST00000274254 A0A1B0GVT2 93 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 HMX2A2RU54 273 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 H3BMM5 538 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 ITGA2BP08514 1039 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 OR56A5P0C7T3 313 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 SERPINB9P50453 376 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 C21orf59P57076 290 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 SRP54P61011 504 aaKnown RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 PYCR3Q53H96 274 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 PTRHD1Q6GMV3 140 aaKnown RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 LAIR1Q6GTX8 287 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 C11orf96Q7Z7L8 435 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 TRAPPC5Q8IUR0 188 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 TSACCQ96A04 125 aaPredicted RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 ATXN7L3BQ96GX2 97 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 LINC00615Q96LM1 132 aaPredicted RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 ZIM3Q96PE6 472 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 NDNQ99608 321 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 GPR22Q99680 433 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 ROPN1BQ9BZX4 212 aaPredicted RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 CCDC68Q9H2F9 335 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 ROPN1Q9HAT0 212 aaPredicted RBP16.96■□□□□ 0.3
SKP2-201ENST00000274254 KLF15Q9UIH9 416 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 ANKRD6Q9Y2G4 727 aa16.96■□□□□ 0.3
SKP2-201ENST00000274254 TP53BP1Q12888 1972 aaPredicted RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 IQCF5A8MTL0 148 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 F8W8V4 182 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 GRID2O43424 1007 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 CTSKP43235 329 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 HK3P52790 923 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 TIAL1Q01085 375 aaKnown RBP eCLIP16.95■□□□□ 0.3
SKP2-201ENST00000274254 BNC1Q01954 994 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 PPARDQ03181 441 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 ZNF844Q08AG5 666 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 IFFO1Q0D2I5 559 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 KIF19Q2TAC6 998 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 CRTC3Q6UUV7 619 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 LRIG3Q6UXM1 1119 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 LRRTM4Q86VH4 590 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 BEND7Q8N7W2 519 aaPredicted RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 ACVR1CQ8NER5 493 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 LKAAEAR1Q8TD35 194 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 EPS8L3Q8TE67 593 aaKnown RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 KCNJ9Q92806 393 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 ATOH1Q92858 354 aaPredicted RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 ERVMER34-1Q9H9K5 563 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 CAPN10Q9HC96 672 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 CYP4F12Q9HCS2 524 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 PSMC3IPQ9P2W1 217 aaPredicted RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 GULP1Q9UBP9 304 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 MTO1Q9Y2Z2 717 aaKnown RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 PRKAB1Q9Y478 270 aa16.95■□□□□ 0.3
SKP2-201ENST00000274254 DNMT3AQ9Y6K1 912 aaPredicted RBP16.95■□□□□ 0.3
SKP2-201ENST00000274254 FAM95CA0A1B0GW59 222 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 RASGRF2O14827 1237 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 KMOO15229 486 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 CDH16O75309 829 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 NIPSNAP2O75323 286 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 CD9P21926 228 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 CNTFP26441 200 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 MPLP40238 635 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 NBL1P41271 181 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 CDKN2DP55273 166 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 ZNF658BQ4V348 819 aaPredicted RBP16.94■□□□□ 0.3
SKP2-201ENST00000274254 HECTD2Q5U5R9 776 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 FAM45BPQ6NSW5 357 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 SLC23A3Q6PIS1 610 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 HDXQ7Z353 690 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 GALNT13Q8IUC8 556 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 OXR1Q8N573 874 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 GPATCH11Q8N954 259 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 FAM45AQ8TCE6 357 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 PANX3Q96QZ0 392 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 CARS2Q9HA77 564 aaKnown RBP16.94■□□□□ 0.3
SKP2-201ENST00000274254 CTNNAL1Q9UBT7 734 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 ZNHIT2Q9UHR6 403 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 MOSPD1Q9UJG1 213 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 VWA7Q9Y334 891 aa16.94■□□□□ 0.3
SKP2-201ENST00000274254 MYO15AQ9UKN7 3530 aa16.93■□□□□ 0.3
SKP2-201ENST00000274254 CABIN1Q9Y6J0 2220 aa16.93■□□□□ 0.3
SKP2-201ENST00000274254 KRT38O76015 456 aa16.93■□□□□ 0.3
SKP2-201ENST00000274254 RASGRP1O95267 797 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms