RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 SMYD1Q8NB12 490 aa13.16□□□□□ -0.3
SMG9-201ENST00000270066 OR2T12Q8NG77 320 aa13.16□□□□□ -0.3
SMG9-201ENST00000270066 SPOCK2Q92563 424 aa13.16□□□□□ -0.3
SMG9-201ENST00000270066 NOL11Q9H8H0 719 aaKnown RBP13.16□□□□□ -0.3
SMG9-201ENST00000270066 TPD52L2O43399 206 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 FAM155BO75949 473 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 SLC35G6P0C7Q6 338 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 IL12RB1P42701 662 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 CLCQ05315 142 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 KIAA0930Q6ICG6 404 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 ABRAXAS1Q6UWZ7 409 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MFSD3Q96ES6 412 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF514Q96K75 400 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 C7orf26Q96N11 449 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TSSK3Q96PN8 268 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TDRD1Q9BXT4 1180 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 SPATA2Q9UM82 520 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF536O15090 1300 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 GRIN2DO15399 1336 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MCIDASD6RGH6 385 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MT-CYBP00156 380 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 PDGFRLQ15198 375 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ADGRF1Q5T601 910 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 HDDC3Q8N4P3 179 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF563Q8TA94 476 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 FCRL5Q96RD9 977 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TRIM39Q9HCM9 518 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TXNRD2Q9NNW7 524 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 DTLQ9NZJ0 730 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MTRRQ9UBK8 725 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 COQ6Q9Y2Z9 468 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TRIM43BA6NCK2 446 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 M0R2N6 131 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 F2P00734 622 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 HCAR3P49019 387 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 C2orf80Q0P641 193 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 BROXQ5VW32 411 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF57Q68EA5 555 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 ESRP1Q6NXG1 681 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 AAGABQ6PD74 315 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 TMEM192Q8IY95 271 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 CLEC4CQ8WTT0 213 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 IL12RB2Q99665 862 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 BRINP2Q9C0B6 783 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 UNC93B1Q9H1C4 597 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 POLR3BQ9NW08 1133 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 A0A1W2PQ45 241 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 A0A1W2PQY0 241 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ILVBLA1L0T0 632 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 SHOX2O60902 331 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 SCN2BO60939 215 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 IFNGP01579 166 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 IGFALSP35858 605 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 RABGGTBP53611 331 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 MTTPP55157 894 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 STXBP1P61764 594 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 USP46P62068 366 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 SPIRE1Q08AE8 756 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 SPANXN2Q5MJ10 180 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ATXN7L2Q5T6C5 722 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 ANKRD22Q5VYY1 191 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 DLK2Q6UY11 383 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ZNF554Q86TJ5 538 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 CELF5Q8N6W0 485 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 ST13P5Q8NFI4 369 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 LMLNQ96KR4 655 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 RPL10LQ96L21 214 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 LPIN3Q9BQK8 851 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 OSBPL7Q9BZF2 842 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 NFKBIL1Q9UBC1 381 aaPredicted RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 RSL24D1Q9UHA3 163 aaKnown RBP13.15□□□□□ -0.3
SMG9-201ENST00000270066 IL36AQ9UHA7 158 aa13.15□□□□□ -0.3
SMG9-201ENST00000270066 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 SLC7A2P52569 658 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 LSM3P62310 102 aaKnown RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 ECT2LQ008S8 904 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 EML3Q32P44 896 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 LPCAT4Q643R3 524 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 FAM180AQ6UWF9 173 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 SNX20Q7Z614 316 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 LDB1Q86U70 411 aaPredicted RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 C2orf73Q8N5S3 287 aaPredicted RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 SLC43A3Q8NBI5 491 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 EURLQ9NYK6 297 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 COL1A1P02452 1464 aaPredicted RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 UGT2B17O75795 530 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 HSPA7P48741 367 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 TTC27Q6P3X3 843 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 CTU1Q7Z7A3 348 aaKnown RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 ATG10Q9H0Y0 220 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 GDAP2Q9NXN4 497 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 ZNF142P52746 1687 aaPredicted RBP13.14□□□□□ -0.31
SMG9-201ENST00000270066 GPR107Q5VW38 600 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 AHI1Q8N157 1196 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 BPIFB6Q8NFQ5 453 aa13.14□□□□□ -0.31
SMG9-201ENST00000270066 RAD51AP1Q96B01 352 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms