RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 HRH2P25021 359 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 TGFBR2P37173 567 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 DDOSTP39656 456 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 SLC26A3P40879 764 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 RFX2P48378 723 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 LIMK2P53671 638 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 B2MP61769 119 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 EFR3AQ14156 821 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 LRRC26Q2I0M4 334 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 RBM48Q5RL73 367 aaKnown RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 CST9Q5W186 159 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 GLYATQ6IB77 296 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 GPR142Q7Z601 462 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 TP53INP2Q8IXH6 220 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CLEC4FQ8N1N0 589 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 ZNF557Q8N988 423 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 MCOLN3Q8TDD5 553 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 NUDT8Q8WV74 236 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 RASSF5Q8WWW0 418 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 RNF31Q96EP0 1072 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 ACOX2Q99424 681 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 LGMNQ99538 433 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 HPS4Q9NQG7 708 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 SLC9A3R1O14745 358 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 ACSL4O60488 711 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 HUS1O60921 280 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CYP7B1O75881 506 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 OR7A10O76100 309 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 PRKD3O94806 890 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 EPN2O95208 641 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CYBBP04839 570 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 IL32P24001 234 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 AP2S1P53680 142 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 MFSD10Q14728 455 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 ZMAT1Q5H9K5 638 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 C10orf62Q5T681 223 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 EFCAB12Q6NXP0 572 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 TUBA3EQ6PEY2 450 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 SYCE2Q6PIF2 218 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 NIPA1Q7RTP0 329 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 AMIGO1Q86WK6 493 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 MFSD6LQ8IWD5 586 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CDKL2Q92772 493 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 ASPSCR1Q9BZE9 553 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 ZNF304Q9HCX3 659 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 NECTIN3Q9NQS3 549 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 CISHQ9NSE2 258 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 POLR3BQ9NW08 1133 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 ABCD2Q9UBJ2 740 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 TMPRSS11EQ9UL52 423 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 SCML1Q9UN30 329 aa8.69□□□□□ -1.02
VAPB-201ENST00000265619 MTF2Q9Y483 593 aaPredicted RBP8.69□□□□□ -1.02
VAPB-201ENST00000265619 BCLAF3A2AJT9 711 aaKnown RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 METTL15A6NJ78 407 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PLK4O00444 970 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PPP6CO00743 305 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TSPAN4O14817 238 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 B4GALT5O43286 388 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PGLSO95336 258 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TRIM16O95361 564 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 CD19P15391 556 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 GSK3BP49841 420 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ISL1P61371 349 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 DBPQ10586 325 aaPredicted RBP8.68□□□□□ -1.02
VAPB-201ENST00000265619 KCNAB2Q13303 367 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SQLEQ14534 574 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 CLCA4Q14CN2 919 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TPRG1LQ5T0D9 272 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 IRAK1BP1Q5VVH5 260 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SPRYD7Q5W111 196 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TMEM65Q6PI78 240 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 METTL7BQ6UX53 244 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PAMR1Q6UXH9 720 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 BEND5Q7L4P6 421 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 WDR49Q8IV35 697 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TCAIMQ8N3R3 496 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 MCPH1Q8NEM0 835 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 GIMAP1Q8WWP7 306 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 ISL2Q96A47 359 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TM9SF2Q99805 663 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 HDHD5Q9BXW7 423 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 MCCC2Q9HCC0 563 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PTPRHQ9HD43 1115 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 EHD3Q9NZN3 535 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 NAALAD2Q9Y3Q0 740 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SCN4AP35499 1836 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 H3BMM5 538 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 SLITRK5O94991 958 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 NTRK1P04629 796 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TPSB2P20231 275 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 DAG1Q14118 895 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TOMM20Q15388 145 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TPSAB1Q15661 275 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 TMEM179BQ7Z7N9 219 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 PLD3Q8IV08 490 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 CEP97Q8IW35 865 aa8.68□□□□□ -1.02
VAPB-201ENST00000265619 OR6J1Q8NGC5 347 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms