RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 LRRC20Q8TCA0 184 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 C2orf49Q9BVC5 232 aaPredicted RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 NMUR1Q9HB89 426 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 MRPL17Q9NRX2 175 aaKnown RBP11.96□□□□□ -0.49
SMG6-201ENST00000263073 BAIAP2Q9UQB8 552 aa11.96□□□□□ -0.49
SMG6-201ENST00000263073 CPNE3O75131 537 aaKnown RBP11.96□□□□□ -0.5
SMG6-201ENST00000263073 PSMA1P25786 263 aaKnown RBP11.96□□□□□ -0.5
SMG6-201ENST00000263073 TLX1P31314 330 aaPredicted RBP11.96□□□□□ -0.5
SMG6-201ENST00000263073 RAB27AP51159 221 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 LRRC73Q5JTD7 316 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 DACT2Q5SW24 774 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 CERS5Q8N5B7 392 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 TMEM203Q969S6 136 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 KCNC2Q96PR1 638 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 PNPLA8Q9NP80 782 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 RIC1Q4ADV7 1423 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 KIF20BQ96Q89 1820 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 EFCAB9A8MZ26 197 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 H3BSH0 61 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 HOXA2O43364 376 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 C4BPAP04003 597 aaKnown RBP11.96□□□□□ -0.5
SMG6-201ENST00000263073 C2orf80Q0P641 193 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 HSPB3Q12988 150 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 E2F2Q14209 437 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 MPPE1Q53F39 396 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 TMPRSS11AQ6ZMR5 421 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 AGMOQ6ZNB7 445 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 ASB18Q6ZVZ8 466 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 TFAP2BQ92481 460 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 TTYH3Q9C0H2 523 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.5
SMG6-201ENST00000263073 C8orf4Q9NR00 106 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 POLE4Q9NR33 117 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 LGALS13Q9UHV8 139 aa11.96□□□□□ -0.5
SMG6-201ENST00000263073 CXorf49A8MYA2 514 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 SLC25A12O75746 678 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 AXLP30530 894 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 THOP1P52888 689 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 FUT2Q10981 343 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 GTF2H2Q13888 395 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 C9orf64Q5T6V5 341 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ANXA8L1Q5VT79 327 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 GTF2H2CQ6P1K8 395 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TRPV3Q8NET8 790 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SPATA5L1Q9BVQ7 753 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SLC35F4A4IF30 521 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 OR2AG2A6NM03 316 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 RPP40O75818 363 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 H6PDO95479 791 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ARF4P18085 180 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 XRCC1P18887 633 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 CD52P31358 61 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 PTGS2P35354 604 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 C9orf57Q5W0N0 161 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 USP30Q70CQ3 517 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ADGRG2Q8IZP9 1017 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 CRYBG2Q8N1P7 616 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ATP6V1C2Q8NEY4 427 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SLC9A6Q92581 669 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TUBA8Q9NY65 449 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 RBM7Q9Y580 266 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 ZNF99A8MXY4 864 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 GOT2P00505 430 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 EPHX2P34913 555 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 KIR3DL1P43629 444 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 LIMK2P53671 638 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 GAD2Q05329 585 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 VGLL4Q14135 290 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 NOL9Q5SY16 702 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 BICRALQ6AI39 1079 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 CADM2Q8N3J6 435 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SCAIQ8N9R8 606 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 HM13Q8TCT9 377 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 NEK7Q8TDX7 302 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TSEN15Q8WW01 171 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 RACGAP1Q9H0H5 632 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SDCBP2Q9H190 292 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 IMP3Q9NV31 184 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 ZNF780BQ9Y6R6 833 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 FABP12A6NFH5 140 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 OR51F1A6NGY5 319 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 MATN2O00339 956 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 GNB5O14775 395 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ZW10O43264 779 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TPSB2P20231 275 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 VARSP26640 1264 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 CHRNA4P43681 627 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 OLIG2Q13516 323 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 TPSAB1Q15661 275 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 ZFP28Q8NHY6 868 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 BARD1Q99728 777 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 CCDC28BQ9BUN5 200 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 MTIF3Q9H2K0 278 aaKnown RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 SPON1Q9HCB6 807 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 MCIDASD6RGH6 385 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 CXCR6O00574 342 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 FOXD2O60548 495 aaPredicted RBP11.95□□□□□ -0.5
SMG6-201ENST00000263073 ZNF132P52740 706 aa11.95□□□□□ -0.5
SMG6-201ENST00000263073 SMIM11AP58511 58 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms