RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ANKRD34CP0C6C1 535 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 ITGB6P18564 788 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 NFKB1P19838 968 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 MSH3P20585 1137 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 COMTP21964 271 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 PTPN3P26045 913 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 SLC19A1P41440 591 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 ATP5OP48047 213 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 ARSDP51689 593 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 NAP1L1P55209 391 aaKnown RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 WNT3AP56704 352 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 UBE2IP63279 158 aaKnown RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 PDE1BQ01064 536 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TLE1Q04724 770 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 ITGA9Q13797 1035 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 IL11RAQ14626 422 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 GSE1Q14687 1217 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 SLC14A2Q15849 920 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 ATP13A5Q4VNC0 1218 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 LDLRAP1Q5SW96 308 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 MFSD7Q6UXD7 560 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 FAM151BQ6UXP7 276 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 AMZ2Q86W34 360 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 PPP1R3BQ86XI6 285 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 SIDT2Q8NBJ9 832 aaKnown RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TEKT5Q96M29 485 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TRIB3Q96RU7 358 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 CHP1Q99653 195 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TSPY26PQ9H489 355 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 IMP3Q9NV31 184 aaKnown RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 SCHIP1Q9P0W5 487 aaPredicted RBP12.04□□□□□ -0.48
TRAF4-202ENST00000262396 SLC23A2Q9UGH3 650 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 RSPH14Q9UHP6 348 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 TUBD1Q9UJT1 453 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 KCND3Q9UK17 655 aa12.04□□□□□ -0.48
TRAF4-202ENST00000262396 GLYATL1P3A0A0U1RQE8 302 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 UBA6A0AVT1 1052 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 MKRN2OSH3BPM6 223 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 CHUKO15111 745 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 STX7O15400 261 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 PSTPIP1O43586 416 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 MFAP3LO75121 409 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 POP7O75817 140 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 STK10O94804 968 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 ZRANB2O95218 330 aaKnown RBP eCLIP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 CETN2P41208 172 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 STAT5AP42229 794 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 MAGEA1P43355 309 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 LEPRP48357 1165 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 ERV3-1Q14264 604 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 GPR18Q14330 331 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 PRPSAP1Q14558 356 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SPA17Q15506 151 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SKIDA1Q1XH10 827 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 TFDP3Q5H9I0 405 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 TMEM220Q6QAJ8 160 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 ABRAXAS1Q6UWZ7 409 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SPOCD1Q6ZMY3 1216 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 TIPARPQ7Z3E1 657 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 GALNT6Q8NCL4 622 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 RNF214Q8ND24 703 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 EID2BQ96D98 161 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 DCUN1D1Q96GG9 259 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 RBM41Q96IZ5 413 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 OLFM3Q96PB7 478 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 VPS35Q96QK1 796 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 VAT1Q99536 393 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 ZNF624Q9P2J8 865 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 NFKBIL1Q9UBC1 381 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SAE1Q9UBE0 346 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 FAM8A1Q9UBU6 413 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 CROTQ9UKG9 612 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 RARRES3Q9UL19 164 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 INTUQ9ULD6 942 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 NENFQ9UMX5 172 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 PSMD13Q9UNM6 376 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 TMEM184BQ9Y519 407 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 KCTD3Q9Y597 815 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SPO11Q9Y5K1 396 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 MN1Q10571 1320 aaPredicted RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 SCN8AQ9UQD0 1980 aa12.03□□□□□ -0.48
TRAF4-202ENST00000262396 FLNBO75369 2602 aaKnown RBP12.03□□□□□ -0.48
TRAF4-202ENST00000262396 PIPSLA2A3N6 862 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 CDC14CA4D256 554 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 C3orf70A6NLC5 250 aaPredicted RBP12.02□□□□□ -0.49
TRAF4-202ENST00000262396 OR2AG2A6NM03 316 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 C2orf81A6NN90 581 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 AURKAO14965 403 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 MAP3K7O43318 606 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 BUD23O43709 281 aaKnown RBP12.02□□□□□ -0.49
TRAF4-202ENST00000262396 UGT1A9O60656 530 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 IPO7O95373 1038 aaKnown RBP12.02□□□□□ -0.49
TRAF4-202ENST00000262396 C9P02748 559 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 RALBP11234 206 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 UGT1A6P19224 532 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 HLA-DPA1P20036 260 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 UGT1A1P22309 533 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 UGT1A4P22310 534 aa12.02□□□□□ -0.49
TRAF4-202ENST00000262396 HMGCLP35914 325 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms