RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 KERAO60938 352 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 CIB2O75838 187 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 BAG2O95816 211 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 PENKP01210 267 aaPredicted RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 HNRNPCP07910 306 aaKnown RBP eCLIP13.43□□□□□ -0.264e-19■■■□□ 18.9
VMP1-201ENST00000262291 LINC00032P0C843 101 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 SLC26A3P40879 764 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 TMED1Q13445 227 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 NFATC2Q13469 925 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ZRSR2Q15696 482 aaKnown RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 C9orf50Q5SZB4 431 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 RAB44Q7Z6P3 723 aaPredicted RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 SATL1Q86VE3 508 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ADGRG2Q8IZP9 1017 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ARHGAP24Q8N264 748 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 SP7Q8TDD2 431 aaPredicted RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 NCSTNQ92542 709 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 L3HYPDHQ96EM0 354 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 KLHL32Q96NJ5 620 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 TTC1Q99614 292 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 CENPKQ9BS16 269 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 CLPBQ9H078 707 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 ZDHHC4Q9NPG8 344 aa13.43□□□□□ -0.26
VMP1-201ENST00000262291 MBD1Q9UIS9 605 aaPredicted RBP13.43□□□□□ -0.26
VMP1-201ENST00000262291 GLYATL1P3A0A0U1RQE8 302 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 ANTXRLA6NF34 631 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 TRPC5OSA6NMA1 111 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 SLCO1B7G3V0H7 640 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PRMT5O14744 637 aaPredicted RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 MAGEC1O60732 1142 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 MTX2O75431 263 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PTGER3P43115 390 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 CLCN7P51798 805 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 CYLC2Q14093 348 aaPredicted RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 METTL21CQ5VZV1 264 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 ADIPOR2Q86V24 386 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 GPR65Q8IYL9 337 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 RSPRY1Q96DX4 576 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 HBEGFQ99075 208 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 P2RY12Q9H244 342 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 SUV39H2Q9H5I1 410 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 CCDC167Q9P0B6 97 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 FAM8A1Q9UBU6 413 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 SLC25A13Q9UJS0 675 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 MRPS23Q9Y3D9 190 aaKnown RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 DNAJC15Q9Y5T4 150 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 MTCL1Q9Y4B5 1905 aaKnown RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 TRANK1O15050 2925 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 CAPN8A6NHC0 703 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PIP5K1BO14986 540 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 SLC25A14O95258 325 aaPredicted RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 ASLP04424 464 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 GRIA2P42262 883 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 GRB7Q14451 532 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 AGKQ53H12 422 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 DUS1LQ6P1R4 473 aaKnown RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 PSRC1Q6PGN9 363 aaPredicted RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 GPSM1Q86YR5 675 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 CEP70Q8NHQ1 597 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 HMGCLL1Q8TB92 370 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PYDC1Q8WXC3 89 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PHF12Q96QT6 1004 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 ZNF385DQ9H6B1 395 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 POPDC3Q9HBV1 291 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 ZBTB26Q9HCK0 441 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 DDX18Q9NVP1 670 aaKnown RBP13.42□□□□□ -0.26
VMP1-201ENST00000262291 COMMD3-BMI1R4GMX3 469 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 PIKFYVEQ9Y2I7 2098 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 EYSQ5T1H1 3165 aa13.42□□□□□ -0.26
VMP1-201ENST00000262291 RGSL1A5PLK6 1076 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 H7C0S8 307 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 GPC4O75487 556 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 CLCQ05315 142 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ZNF77Q15935 545 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 RBBP7Q16576 425 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 C12orf40Q86WS4 652 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ACOX2Q99424 681 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 TUBB1Q9H4B7 451 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 STX18Q9P2W9 335 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 GBF1Q92538 1859 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 CARNS1A5YM72 827 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 KRT87PA6NCN2 255 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 UBDO15205 165 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 CRCPO75575 148 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 TCN1P20061 433 aaPredicted RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 ITGALP20701 1170 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 PSMA3P25788 255 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 PTSQ03393 145 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 UGT3A2Q3SY77 523 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 CARD16Q5EG05 197 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 AARS2Q5JTZ9 985 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 PRSS36Q5K4E3 855 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 ZNF648Q5T619 568 aaPredicted RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 SFTPA1Q8IWL2 248 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 DSELQ8IZU8 1212 aa13.41□□□□□ -0.26
VMP1-201ENST00000262291 NKAPQ8N5F7 415 aaKnown RBP13.41□□□□□ -0.26
VMP1-201ENST00000262291 PCDH20Q8N6Y1 951 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms