RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 MPP3Q13368 585 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 OLIG2Q13516 323 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 C1orf61Q13536 156 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 LBRQ14739 615 aaKnown RBP13.22□□□□□ -0.29
SGCA-201ENST00000262018 EFTUD2Q15029 972 aaKnown RBP eCLIP13.22□□□□□ -0.29
SGCA-201ENST00000262018 TMED2Q15363 201 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 TMCO4Q5TGY1 634 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 KYAT3Q6YP21 454 aaKnown RBP13.22□□□□□ -0.29
SGCA-201ENST00000262018 OR7D4Q8NG98 312 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 SPATA22Q8NHS9 363 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 C9orf43Q8TAL5 461 aaPredicted RBP13.22□□□□□ -0.29
SGCA-201ENST00000262018 DCAKDQ8WVC6 231 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 USP7Q93009 1102 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 IMP4Q96G21 291 aaKnown RBP13.22□□□□□ -0.29
SGCA-201ENST00000262018 PAFAH2Q99487 392 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 SPON2Q9BUD6 331 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 CAPS2Q9BXY5 557 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 NT5MQ9NPB1 228 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 GPR27Q9NS67 375 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 SYBUQ9NX95 663 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 BFARQ9NZS9 450 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 SPASTQ9UBP0 616 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 VPS51Q9UID3 782 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 SLC25A13Q9UJS0 675 aa13.22□□□□□ -0.29
SGCA-201ENST00000262018 CENPEQ02224 2701 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 FAM159BA6NKW6 160 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 D6RAR5 112 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 KPNA3O00505 521 aaPredicted RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 KDELR3O43731 214 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 ANXA6P08133 673 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 MDH1P40925 334 aaKnown RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 ETV5P41161 510 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 MSH2P43246 934 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 VASPP50552 380 aaPredicted RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 CCL7P80098 99 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 CDH17Q12864 832 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 PDE1CQ14123 709 aaPredicted RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 FRG1Q14331 258 aaKnown RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 KBTBD12Q3ZCT8 623 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 RETSATQ6NUM9 610 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 ESRP1Q6NXG1 681 aaKnown RBP13.21□□□□□ -0.3
SGCA-201ENST00000262018 KDELC1Q6UW63 502 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 Q6ZVU0 165 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 TRABD2AQ86V40 505 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 DTX1Q86Y01 620 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 ZNF354CQ86Y25 554 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 RBFAQ8N0V3 343 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 SDR16C5Q8N3Y7 309 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 SLC44A1Q8WWI5 657 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 TADA1Q96BN2 335 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 TMEM74Q96NL1 305 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 TBL1YQ9BQ87 522 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 FAM107BQ9H098 131 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 MOCS1Q9NZB8 636 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 UBP1Q9NZI7 540 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 GULP1Q9UBP9 304 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 TBK1Q9UHD2 729 aa13.21□□□□□ -0.3
SGCA-201ENST00000262018 MAGEB16A2A368 324 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 MT-CYBP00156 380 aaPredicted RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 RPLP0P05388 317 aaKnown RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 POU3F2P20265 443 aaPredicted RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 CCKBRP32239 447 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 RABIFP47224 123 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 CRADDP78560 199 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 SLC20A2Q08357 652 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 NIPAL4Q0D2K0 466 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 CCDC15Q0P6D6 951 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 DLG2Q15700 870 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 PRRT3Q5FWE3 981 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 SPANXN3Q5MJ09 141 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 ZNF787Q6DD87 383 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 DENND5AQ6IQ26 1287 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 CASC4Q6P4E1 433 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 ZNF449Q6P9G9 518 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 PGBD5Q8N414 524 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 DNAAF3Q8N9W5 541 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 ARRDC2Q8TBH0 407 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 MZB1Q8WU39 189 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 BTN2A2Q8WVV5 523 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 CCDC74AQ96AQ1 378 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 MRGPRX2Q96LB1 330 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 PHF12Q96QT6 1004 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 FICDQ9BVA6 458 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 CPEB1Q9BZB8 566 aaKnown RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 IL22Q9GZX6 179 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 TCEAL2Q9H3H9 227 aaPredicted RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 DYRK4Q9NR20 520 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 PIH1D1Q9NWS0 290 aaKnown RBP13.2□□□□□ -0.3
SGCA-201ENST00000262018 SENP1Q9P0U3 644 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 SAMD15Q9P1V8 674 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 ZNF180Q9UJW8 692 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 HS3ST2Q9Y278 367 aa13.2□□□□□ -0.3
SGCA-201ENST00000262018 FAM237BA0A1B0GVD1 139 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 A1L4Q6 167 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 RAD51BO15315 384 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SPINT1O43278 529 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 ATP9BO43861 1147 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 SNAP91O60641 907 aa13.19□□□□□ -0.3
SGCA-201ENST00000262018 ZMPSTE24O75844 475 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms