RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ASB1Q9Y576 335 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 PCDHB7Q9Y5E2 793 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 OAS3Q9Y6K5 1087 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MROH6A6NGR9 719 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 E5RI56 91 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 RPP40O75818 363 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 GUCA1CO95843 209 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 HSD17B1P14061 328 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 RHOQP17081 205 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 RFC2P35250 354 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 PRMT2P55345 433 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 C21orf59P57076 290 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TIAL1Q01085 375 aaKnown RBP eCLIP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 GNA12Q03113 381 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MAPRE1Q15691 268 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 C18orf21Q32NC0 220 aaPredicted RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 INTS11Q5TA45 600 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 LCN8Q6JVE9 175 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MSANTD2Q6P1R3 559 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TRIM74Q86UV6 250 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TRIM73Q86UV7 250 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TMEM173Q86WV6 379 aaPredicted RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 HS3ST5Q8IZT8 346 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 OR10Q1Q8NGQ4 319 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 METTL6Q8TCB7 284 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 CCDC138Q96M89 665 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 TSEN34Q9BSV6 310 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 THUMPD3Q9BV44 507 aaKnown RBP14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MCOLN1Q9GZU1 580 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 MARCH2Q9P0N8 246 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 PCDHGC4Q9Y5F7 938 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 A0A0C4DFX4 3053 aa14.33□□□□□ -0.12
SFSWAP-201ENST00000261674 THSD7BQ9C0I4 1608 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PDCD11Q14690 1871 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 NOBOXO60393 691 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ZBTB11O95625 1053 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 UGT1A1P22309 533 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 UGT1A4P22310 534 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 UGT1A3P35503 534 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 UGT1A5P35504 534 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 NR6A1Q15406 480 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 CYBRD1Q53TN4 286 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ACBD5Q5T8D3 534 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 C8orf82Q6P1X6 216 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 IL27RAQ6UWB1 636 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 MON1AQ86VX9 555 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ZC3H7AQ8IWR0 971 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 UMODL1-AS1Q8N2C9 162 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 SEPT5Q99719 369 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 AARSD1Q9BTE6 412 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 NACA2Q9H009 215 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 SYTL2Q9HCH5 934 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 GPR45Q9Y5Y3 372 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 U3KQV3 271 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 MYLKQ15746 1914 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 GSTA4O15217 222 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ACOX3O15254 700 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 FAM163BP0C2L3 166 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 IL7RP16871 459 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 RPL17P18621 184 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 HMOX2P30519 316 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PHEXP78562 749 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP6AP1Q15904 470 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP6AP1LQ52LC2 224 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 SLC24A5Q71RS6 500 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 GLT6D1Q7Z4J2 308 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PHYKPLQ8IUZ5 450 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 CCDC117Q8IWD4 279 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 MFSD2AQ8NA29 543 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 EEF1AKMT1Q8WVE0 214 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ARMC7Q9H6L4 198 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PCDHA9Q9Y5H5 950 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 DGKBQ9Y6T7 804 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 TRIM43BA6NCK2 446 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 TNFRSF10BO14763 440 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 FFAR3O14843 346 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 GPR42O15529 346 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 RASAL1O95294 804 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PAPSS2O95340 614 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 PARNO95453 639 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 FGF4P08620 206 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 CNPP09543 421 aaKnown RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 KANK2Q63ZY3 851 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP6V0D2Q8N8Y2 350 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 LPCAT1Q8NF37 534 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 OR2T11Q8NH01 316 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 TRIM43Q96BQ3 446 aaPredicted RBP14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 C17orf80Q9BSJ5 609 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 BDH2Q9BUT1 245 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 SMURF2Q9HAU4 748 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 ABCD2Q9UBJ2 740 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 SPO11Q9Y5K1 396 aa14.32□□□□□ -0.12
SFSWAP-201ENST00000261674 GPIP06744 558 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 IL12AP29459 219 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 HOXC13P31276 330 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 ATP4BP51164 291 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 STC1P52823 247 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 DEFB103AP81534 67 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 TUSC3Q13454 348 aa14.31□□□□□ -0.12
SFSWAP-201ENST00000261674 SELPLGQ14242 412 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms