RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ZPBP2Q6X784 338 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 RIOX2Q8IUF8 465 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 IL31RAQ8NI17 732 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 CERS2Q96G23 380 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 TEX12Q9BXU0 123 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 EML4Q9HC35 981 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 IFT46Q9NQC8 304 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 C3orf18Q9UK00 162 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 PCDHB3Q9Y5E6 796 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 IFT172Q9UG01 1749 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 H3BM21 787 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 RGS10O43665 173 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 LGALS2P05162 132 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 APOA4P06727 396 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 POLBP06746 335 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 CHRM5P08912 532 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SPNP16150 400 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 ITGB5P18084 799 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 CYP2A7P20853 494 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 MAZP56270 477 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 CACHD1Q5VU97 1274 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 OVOS1Q6IE37 1185 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 METTL3Q86U44 580 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 EID3Q8N140 333 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 AADATQ8N5Z0 425 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 TMEM102Q8N9M5 508 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 OR6Q1Q8NGQ2 317 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 OR9I1Q8NGQ6 314 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 RHOXF1Q8NHV9 184 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 UTP15Q8TED0 518 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 RPL3LQ92901 407 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SPOCK3Q9BQ16 436 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 DRG1Q9Y295 367 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 MEIOCA2RUB1 952 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 G3V2T6 193 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HOXA2O43364 376 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 PLA2G6O60733 806 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 F9P00740 461 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HIST1H2AGP0C0S8 130 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SLC2A3P11169 496 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HIST1H2ADP20671 130 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 IDH2P48735 452 aaKnown RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 NDST1P52848 882 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 ERVK-21P61565 698 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 GRSF1Q12849 480 aaKnown RBP eCLIP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 TMEM132BQ14DG7 1078 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 VPS26BQ4G0F5 336 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HSD17B12Q53GQ0 312 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 C10orf62Q5T681 223 aaPredicted RBP12.87□□□□□ -0.35
TMEM260-201ENST00000261556 LYSMD2Q8IV50 215 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SOCS4Q8WXH5 440 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 FBXW5Q969U6 566 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 DIRAS2Q96HU8 199 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HIST1H2AHQ96KK5 128 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 PGLYRP2Q96PD5 576 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 HIST1H2AJQ99878 128 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 H2AFJQ9BTM1 129 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 B3GNT4Q9C0J1 378 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 ASB7Q9H672 318 aa12.87□□□□□ -0.35
TMEM260-201ENST00000261556 H3BMM5 538 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 FAM189A1O60320 539 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 ITGAVP06756 1048 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 TGM1P22735 817 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 HTR1BP28222 390 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 SNTA1Q13424 505 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 ANGPT1Q15389 498 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 UXS1Q8NBZ7 420 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 DPF3Q92784 378 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 IL1RAPQ9NPH3 570 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 IMPAD1Q9NX62 359 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 MTF2Q9Y483 593 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 CIB4A0PJX0 185 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 SYNDIG1LA6NDD5 238 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 TMEM233B4DJY2 109 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 AKR7A2O43488 359 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 MGAT1P26572 445 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 POLD2P49005 469 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 PSEN2P49810 448 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 ZNF177Q13360 481 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 GRM7Q14831 915 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 MED22Q15528 200 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 NAPEPLDQ6IQ20 393 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 MZT2BQ6NZ67 158 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 EDEM1Q92611 657 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 MLPHQ9BV36 600 aaPredicted RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 KCTD5Q9NXV2 234 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 COPG1Q9Y678 874 aaKnown RBP12.86□□□□□ -0.35
TMEM260-201ENST00000261556 PRAMEF33A0A0G2JMD5 474 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 SLC12A8A0AV02 714 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 SULT1B1O43704 296 aa12.86□□□□□ -0.35
TMEM260-201ENST00000261556 PRAMEF10O60809 474 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms