RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 MTX2O75431 263 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 CER1O95813 267 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 AKT1P31749 480 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 LEPRP48357 1165 aaKnown RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 CDKN1CP49918 316 aaPredicted RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 ATXN3P54252 364 aaPredicted RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 SF3A2Q15428 464 aaKnown RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 TYSND1Q2T9J0 566 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 LGSNQ5TDP6 509 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 TAOK1Q7L7X3 1001 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 SERPINA9Q86WD7 417 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 CYP4X1Q8N118 509 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 PDXPQ96GD0 296 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 RBBP8Q99708 897 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 GTPBP2Q9BX10 602 aaKnown RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 TRIM39Q9HCM9 518 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 FGF22Q9HCT0 170 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 FBXO6Q9NRD1 293 aaPredicted RBP20.44■□□□□ 0.86
RTCA-201ENST00000260563 DNAJC28Q9NX36 388 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 SLC17A4Q9Y2C5 497 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 TMEM98Q9Y2Y6 226 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 KNL1Q8NG31 2342 aa20.44■□□□□ 0.86
RTCA-201ENST00000260563 PRSS38A1L453 326 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 TNFRSF10CO14798 259 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 KRT38O76015 456 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 AHSGP02765 367 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 MSH3P20585 1137 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 CNTFP26441 200 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 GABRB3P28472 473 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 PMLP29590 882 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 PPARDQ03181 441 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 EIF2B5Q13144 721 aaKnown RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 GTF2H3Q13889 308 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 HSP90B2PQ58FF3 399 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ZNF648Q5T619 568 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 PIANPQ8IYJ0 282 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 DCLK2Q8N568 766 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ARL8AQ96BM9 186 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ELF4Q99607 663 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 TTC1Q99614 292 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 COPS8Q99627 209 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 MCMBPQ9BTE3 642 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 OR2AG1Q9H205 316 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 PARD6AQ9NPB6 346 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 MED4Q9NPJ6 270 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 MRPL40Q9NQ50 206 aaKnown RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 GPR89AB7ZAQ6 455 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 H3BM21 787 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 VEGFDO43915 354 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 KRT37O76014 449 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 S1PR4O95977 384 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 CEACAM5P06731 702 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 GPR89BP0CG08 455 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 RALBP11234 206 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ATP5DP30049 168 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 SPRP35270 261 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 PPARGP37231 505 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 CD151P48509 253 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 POLD2P49005 469 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 TTPAP49638 278 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 BLKP51451 505 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 SRP54P61011 504 aaKnown RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 ZNF423Q2M1K9 1284 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ALG11Q2TAA5 492 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 HLA-BQ31612 363 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 KHDC1Q4VXA5 237 aaKnown RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 LYPLAL1Q5VWZ2 237 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 CERS6Q6ZMG9 384 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 PRR23CQ6ZRP0 262 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ADGRG6Q86SQ4 1221 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 PNPLA1Q8N8W4 532 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 HEXDCQ8WVB3 486 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 OR1E3Q8WZA6 343 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 TSACCQ96A04 125 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 DCUN1D1Q96GG9 259 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 TCF12Q99081 682 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 STMN4Q9H169 189 aaPredicted RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 RHOJQ9H4E5 214 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 GAREM1Q9H706 876 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 CYP4F12Q9HCS2 524 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 INTS10Q9NVR2 710 aaKnown RBP20.43■□□□□ 0.86
RTCA-201ENST00000260563 ZDHHC3Q9NYG2 299 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 ATXN10Q9UBB4 475 aa20.43■□□□□ 0.86
RTCA-201ENST00000260563 CFAP99D6REC4 459 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 PFDN6O15212 129 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 FOXD2O60548 495 aaPredicted RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 HAUS5O94927 633 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 RASGRP1O95267 797 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 ITGA2BP08514 1039 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 SNRPAP09012 282 aaKnown RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 NME1P15531 152 aaKnown RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 ARRB1P49407 418 aaPredicted RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 LIMK2P53671 638 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 TMEM115Q12893 351 aaPredicted RBP20.42■□□□□ 0.86
RTCA-201ENST00000260563 ITIH4Q14624 930 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 DBN1Q16643 649 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 TTMPQ5BVD1 217 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 ZNF542PQ5EBM4 170 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 ZNF789Q5FWF6 425 aa20.42■□□□□ 0.86
RTCA-201ENST00000260563 TNFAIP8L3Q5GJ75 292 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms