RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GSDMCQ9BYG8 508 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 MTRF1LQ9UGC7 380 aaKnown RBP16.56■□□□□ 0.24
SDCBP-201ENST00000260130 COL5A1P20908 1838 aaPredicted RBP16.56■□□□□ 0.24
SDCBP-201ENST00000260130 CACNA1AO00555 2505 aa16.56■□□□□ 0.24
SDCBP-201ENST00000260130 H7C0S8 307 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CCL22O00626 93 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 MTX2O75431 263 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PSMA3P25788 255 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CA5AP35218 305 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PTGIRP43119 386 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 NPY2RP49146 381 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PLTPP55058 493 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 SESN2P58004 480 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 DAB2P98082 770 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 TMEM115Q12893 351 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 NFATC2Q13469 925 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 LDLRAP1Q5SW96 308 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 GKAP1Q5VSY0 366 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 LRRC8BQ6P9F7 803 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 NRROSQ86YC3 692 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 FAM46DQ8NEK8 389 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 GLMNQ92990 594 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PGM2Q96G03 612 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 SEC16BQ96JE7 1060 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 NCKIPSDQ9NZQ3 722 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PRKAB1Q9Y478 270 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PLEKHM1Q9Y4G2 1056 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PCYT1BQ9Y5K3 369 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 ST14Q9Y5Y6 855 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 SCN8AQ9UQD0 1980 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CCDC78A2IDD5 438 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 AGAP14A8MT82 685 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CHUKO15111 745 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CDK14O94921 469 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CKMT1AP12532 417 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 MNAT1P51948 309 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 LRP8Q14114 963 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 KHDC1Q4VXA5 237 aaKnown RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 GPRC6AQ5T6X5 926 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 ANKRD22Q5VYY1 191 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 CPLX4Q7Z7G2 160 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 PNPLA1Q8N8W4 532 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 TTC25Q96NG3 672 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 IL22Q9GZX6 179 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 BFARQ9NZS9 450 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 GPR34Q9UPC5 381 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 SNX24Q9Y343 169 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 SLC30A1Q9Y6M5 507 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 LRP4O75096 1905 aa16.55■□□□□ 0.24
SDCBP-201ENST00000260130 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
SDCBP-201ENST00000260130 GRID2O43424 1007 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 MYF5P13349 255 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ACP1P24666 158 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 AK4P27144 223 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 MC4RP32245 332 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 DUSP3P51452 185 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 PTK6Q13882 451 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 PCID2Q5JVF3 399 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 TSTD2Q5T7W7 516 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ZNF534Q76KX8 674 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 CHST15Q7LFX5 561 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 NLRP9Q7RTR0 991 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 SNX20Q7Z614 316 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 DDHD1Q8NEL9 900 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 PPHLN1Q8NEY8 458 aaKnown RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 FAM129AQ9BZQ8 928 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 DPEP2Q9H4A9 486 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 EVA1BQ9NVM1 165 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 RIMKLBQ9ULI2 386 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 LY6G6EA0A0G2JKS1 128 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ITGALP20701 1170 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ACADVLP49748 655 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 GPR33Q49SQ1 333 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 SLC30A9Q6PML9 568 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ZDHHC24Q6UX98 284 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 SYDE1Q6ZW31 735 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 SLC35F3Q8IY50 421 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 FBXO25Q8TCJ0 367 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 CHMP6Q96FZ7 201 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ZNF778Q96MU6 729 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ZCCHC2Q9C0B9 1178 aaKnown RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 STMN4Q9H169 189 aaPredicted RBP16.54■□□□□ 0.24
SDCBP-201ENST00000260130 EPB41L4BQ9H329 900 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 TAAR2Q9P1P5 351 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 ASIC3Q9UHC3 531 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 TCAF1Q9Y4C2 921 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 PCDHGA1Q9Y5H4 931 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 U3KQA8 63 aa16.54■□□□□ 0.24
SDCBP-201ENST00000260130 TMEM63AO94886 807 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 DKK1O94907 266 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 TRIM16O95361 564 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ADRB1P08588 477 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ACTR1BP42025 376 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 RPIAP49247 311 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 ACTR1AP61163 376 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 GTF2H3Q13889 308 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 SLMAPQ14BN4 828 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 NR0B2Q15466 257 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 CCDC157Q569K6 752 aa16.53■□□□□ 0.24
SDCBP-201ENST00000260130 OGFOD3Q6PK18 319 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms