RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 PLD3Q8IV08 490 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 PGAM4Q8N0Y7 254 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 ZFYVE19Q96K21 471 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 MFSD1Q9H3U5 465 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 LRTM1Q9HBL6 345 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 RHBDL2Q9NX52 303 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 SCN3BQ9NY72 215 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 CNOT6Q9ULM6 557 aaKnown RBP12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.38
HS6ST1-201ENST00000259241 ILVBLA1L0T0 632 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ANKDD1BA6NHY2 528 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 H3BM21 787 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 FGF18O76093 207 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 EPN2O95208 641 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 HTR7P34969 479 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 C2orf27AQ580R0 203 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 Q6ZVL8 140 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 OR10A6Q8NH74 314 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 B4GALNT2Q8NHY0 566 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 OSCP1Q8WVF1 389 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ANKRD49Q8WVL7 239 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 MIEF2Q96C03 454 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SLC7A5P2Q9GIP4 190 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 MYRFQ9Y2G1 1151 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ZNF840PA6NDX5 716 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SLC31A1O15431 190 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 GRK3P35626 688 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 CHN2P52757 468 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SLC18A1P54219 525 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 RAD23AP54725 363 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 CDKN2DP55273 166 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SEC13P55735 322 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ACTR3P61158 418 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 MAD2L1Q13257 205 aaPredicted RBP12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ZNF648Q5T619 568 aaPredicted RBP12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 PSAPL1Q6NUJ1 521 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TMEM220Q6QAJ8 160 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 GALNT5Q7Z7M9 940 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 CBR4Q8N4T8 237 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 OR2T12Q8NG77 320 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SLC45A3Q96JT2 553 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TMEM248Q9NWD8 314 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 HAS3O00219 553 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 SLC9A3R1O14745 358 aaPredicted RBP12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 VPS4BO75351 444 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 STC2O76061 302 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TNFAIP8O95379 198 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 CLTBP09497 229 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 ARSAP15289 507 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 HPCAP84074 193 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TP53BP2Q13625 1128 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TEAD2Q15562 447 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 PRMT9Q6P2P2 845 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D19Q8N5T2 526 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TNIP2Q8NFZ5 429 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 PLD4Q96BZ4 506 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 IMP4Q96G21 291 aaKnown RBP12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 C20orf27Q9GZN8 174 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 OSER1Q9NX31 292 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 MCM8Q9UJA3 840 aa12.7□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3DA0A087WVF3 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3IA0A087WXS9 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3EA0A087X179 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3KA0A087X1G2 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 C15orf38-AP3S2A0A0A6YYH1 394 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3FA6NER0 549 aaPredicted RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3LB9A6J9 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TEX28O15482 410 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 RNASEH2AO75792 299 aaKnown RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 CST1P01037 141 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 ESR1P03372 595 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3HP0C7X1 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 PTGER3P43115 390 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 AP1S1P61966 158 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 RABL3Q5HYI8 236 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3GQ6DHY5 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3CQ6IPX1 549 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TMEM26Q6ZUK4 368 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TBC1D3Q8IZP1 549 aaPredicted RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 ASZ1Q8WWH4 475 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 SKA1Q96BD8 255 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 DUS2Q9NX74 493 aaKnown RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 MATN2O00339 956 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 KPNA5O15131 536 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TP73O15350 636 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 LDB2O43679 373 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 GBAP04062 536 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.384e-11■■□□□ 12.3
HS6ST1-201ENST00000259241 PABPC1P11940 636 aaKnown RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 IMPDH1P20839 514 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 CNTN1Q12860 1018 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 TXNDC11Q6PKC3 985 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 CERS6Q6ZMG9 384 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 MBOAT1Q6ZNC8 495 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 EID3Q8N140 333 aa12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 BEND7Q8N7W2 519 aaPredicted RBP12.69□□□□□ -0.38
HS6ST1-201ENST00000259241 CANT1Q8WVQ1 401 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms