RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 DDX54Q8TDD1 881 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 RSC1A1Q92681 617 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 C18orf25Q96B23 403 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MTERF3Q96E29 417 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 ZNF514Q96K75 400 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MAGEB10Q96LZ2 347 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 OR5M11Q96RB7 305 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 KCNJ15Q99712 375 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 NFKBIZQ9BYH8 718 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 OR51V1Q9H2C8 321 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 UNKLQ9H9P5 680 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PAK6Q9NQU5 681 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TLR9Q9NR96 1032 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DNAJC28Q9NX36 388 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MPP6Q9NZW5 540 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PISDQ9UG56 409 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 BAIAP2Q9UQB8 552 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 KLHL20Q9Y2M5 609 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 COPG1Q9Y678 874 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 SAGE2PA6NJ88 616 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 FRS3O43559 492 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TGM6O95932 706 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 ADRB1P08588 477 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MSH3P20585 1137 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 BMP6P22004 513 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 GNPDA1P46926 289 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 NOMO3P69849 1222 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 EMC2Q15006 297 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 NOMO1Q15155 1222 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TWISTNBQ3B726 338 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 SLC36A3Q495N2 470 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 HSD17B12Q53GQ0 312 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MFSD5Q6N075 450 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 FDX2Q6P4F2 183 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 PAGE2Q7Z2X7 111 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CENPLQ8N0S6 344 aaPredicted RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 GMCL1P1Q8NEA9 526 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DEDD2Q8WXF8 326 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TNFRSF14Q92956 283 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 RFT1Q96AA3 541 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 AP2M1Q96CW1 435 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 LRIG1Q96JA1 1093 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 LRFN5Q96NI6 719 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CRAMP1Q96RY5 1269 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 RBM15Q96T37 977 aaKnown RBP eCLIP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 FMO2Q99518 471 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TXN2Q99757 166 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MND1Q9BWT6 205 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 TRIM54Q9BYV2 358 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 SLC12A5Q9H2X9 1139 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CATSPERZQ9NTU4 200 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 ZDHHC18Q9NUE0 388 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 COPG2Q9UBF2 871 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 DBR1Q9UK59 544 aaKnown RBP7.68□□□□□ -1.18
GPNMB-201ENST00000258733 CA14Q9ULX7 337 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 MGAT4BQ9UQ53 548 aa7.68□□□□□ -1.18
GPNMB-201ENST00000258733 SERTM2A0A1B0GWG4 89 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 GNG14A0A1W2PPG7 69 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 H3BRB1 525 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 H7C2Y5 167 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SCAMP1O15126 338 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 MAGEB2O15479 319 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 DAPK3O43293 454 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SEC14L5O43304 696 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 PDE9AO76083 593 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 MOCS3O95396 460 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 UGT2B4P06133 528 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 CYP2D6P10635 497 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SLC2A4P14672 509 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 ATP2B4P23634 1241 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 FPR3P25089 353 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 GRIA3P42263 894 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 MTHFSP49914 203 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 ARSFP54793 590 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 HTRA4P83105 476 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 RGS1Q08116 209 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 IFRD2Q12894 506 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 NR1H3Q13133 447 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 KRT31Q15323 416 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SLC9C2Q5TAH2 1124 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 ANGEL2Q5VTE6 544 aaKnown RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 STEAP3Q658P3 488 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SLC25A25Q6KCM7 469 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 NPSR1Q6W5P4 371 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 COMMD7Q86VX2 200 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 OR5M1Q8NGP8 315 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 PPP1R13LQ8WUF5 828 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 SLC25A36Q96CQ1 311 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 NXPE2Q96DL1 559 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 THTPAQ9BU02 230 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 OSBPL8Q9BZF1 889 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 ROGDIQ9GZN7 287 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 NAA50Q9GZZ1 169 aaKnown RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 ADAMTS10Q9H324 1103 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 DDX31Q9H8H2 851 aaKnown RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 IFT80Q9P2H3 777 aaPredicted RBP7.67□□□□□ -1.18
GPNMB-201ENST00000258733 CDH22Q9UJ99 828 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 USP18Q9UMW8 372 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 PCDHA1Q9Y5I3 950 aa7.67□□□□□ -1.18
GPNMB-201ENST00000258733 FMN2Q9NZ56 1722 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms