RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 SUPT3HB4E1H0 165 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 GFRA2O00451 464 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 BIRC5O15392 142 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 ZBTB14O43829 449 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 SUPT3HO75486 399 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 IL1BP01584 269 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 MZF1P28698 734 aaPredicted RBP8.59□□□□□ -1.04
VPS4B-201ENST00000238497 CCNFP41002 786 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 DLG1Q12959 904 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 IHHQ14623 411 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 RPS6KA2Q15349 733 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 KIF19Q2TAC6 998 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 PITRM1Q5JRX3 1037 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 STPG1Q5TH74 334 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 HECTD2Q5U5R9 776 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 RANBP10Q6VN20 620 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 SLC36A4Q6YBV0 504 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 ACAD11Q709F0 780 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 ADIPOR2Q86V24 386 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 APCDD1Q8J025 514 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 PCDH20Q8N6Y1 951 aaKnown RBP8.59□□□□□ -1.04
VPS4B-201ENST00000238497 ZNF557Q8N988 423 aaPredicted RBP8.59□□□□□ -1.04
VPS4B-201ENST00000238497 PPFIBP2Q8ND30 876 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 LOXL4Q96JB6 756 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 SLC45A3Q96JT2 553 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 KIFC1Q9BW19 673 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 GPR63Q9BZJ6 419 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 FANCMQ8IYD8 2048 aa8.59□□□□□ -1.04
VPS4B-201ENST00000238497 EME2A4GXA9 379 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 E5RI56 91 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 STX16-NPEPL1H3BU86 382 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PPP6CO00743 305 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 STX7O15400 261 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 IGLV3-27P01718 113 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ZNF806P0C7X5 589 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ARNTP27540 789 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 CD6P30203 668 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PTDSS1P48651 473 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 RHOAP61586 193 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 BNIPLQ7Z465 357 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 MMAAQ8IVH4 418 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 FIBINQ8TAL6 211 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 NETO1Q8TDF5 533 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SORT1Q99523 831 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 GABRG3Q99928 467 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 RNPEPL1Q9HAU8 725 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TMEM74BQ9NUR3 256 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SUN2Q9UH99 717 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 MBD1Q9UIS9 605 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PCDHGA5Q9Y5G8 931 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 IGHV1OR15-9A0A0B4J2B8 117 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 A0A1B0GVM2 712 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TCAF2A6NFQ2 919 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TTC34A8MYJ7 566 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 G3V2L1 256 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 CD3EAPO15446 510 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 RNASEH2AO75792 299 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TGDSO95455 350 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 GUCA1CO95843 209 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ALPIP09923 528 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SDHBP21912 280 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TGM1P22735 817 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PSMD8P48556 350 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 RPL14P50914 215 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TPMTP51580 245 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ECT2LQ008S8 904 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 CCDC15Q0P6D6 951 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PLEKHG6Q3KR16 790 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 LSM12Q3MHD2 195 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 AGAP9Q5VTM2 703 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SYT12Q8IV01 421 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 CENPLQ8N0S6 344 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 OR2I1PQ8NGU4 316 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 OR2T3Q8NH03 318 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SCG3Q8WXD2 468 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 INPP5DQ92835 1189 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ATP6V1E2Q96A05 226 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 ZC3H10Q96K80 434 aaKnown RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 TUBB6Q9BUF5 446 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PIF1Q9H611 641 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 SEMA4BQ9NPR2 832 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-201ENST00000238497 BTRCQ9Y297 605 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 PTGDR2Q9Y5Y4 395 aa8.58□□□□□ -1.04
VPS4B-201ENST00000238497 LRP3O75074 770 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 PEX11AO75192 247 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 GSRP00390 522 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 SERPINA6P08185 405 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 SERINC3Q13530 473 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 PTPRNQ16849 979 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 MPP7Q5T2T1 576 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 LIPMQ5VYY2 423 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 TIFABQ6ZNK6 161 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 RIPOR1Q6ZS17 1223 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 MAVSQ7Z434 540 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 IFNEQ86WN2 208 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 CAMK1DQ8IU85 385 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 GABPB2Q8TAK5 448 aaPredicted RBP8.57□□□□□ -1.04
VPS4B-201ENST00000238497 TSGA13Q96PP4 275 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 GPR22Q99680 433 aa8.57□□□□□ -1.04
VPS4B-201ENST00000238497 NPAS2Q99743 824 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms