RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 ZNF8P17098 575 aaPredicted RBP11.02□□□□□ -0.65
MSH6-201ENST00000234420 MAXP61244 160 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 CYP2A13Q16696 494 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 TMEM53Q6P2H8 277 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PM20D2Q8IYS1 436 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 TCEANCQ8N8B7 351 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ACTL9Q8TC94 416 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SLC39A3Q9BRY0 314 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ST3GAL5Q9UNP4 418 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 MRPS17Q9Y2R5 130 aaKnown RBP11.02□□□□□ -0.65
MSH6-201ENST00000234420 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 URADA6NGE7 173 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 UGT2B4P06133 528 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PRKCHP24723 683 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 RENBPP51606 427 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 NAGLUP54802 743 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 GNG2P59768 71 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ZNF470Q6ECI4 717 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ALG1LQ6GMV1 187 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SLC30A6Q6NXT4 461 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 THAP5Q7Z6K1 395 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 TMEM17Q86X19 198 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SLITRK4Q8IW52 837 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 TESCQ96BS2 214 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 LIN37Q96GY3 246 aaPredicted RBP11.02□□□□□ -0.65
MSH6-201ENST00000234420 CKLFQ9UBR5 152 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 SORCS3Q9UPU3 1222 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 LDB2O43679 373 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 YBX3P16989 372 aaKnown RBP eCLIP11.02□□□□□ -0.651e-10■■□□□ 13.6
MSH6-201ENST00000234420 ITPK1Q13572 414 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PCID2Q5JVF3 399 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 IDNKQ5T6J7 187 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 ZNF517Q6ZMY9 492 aaPredicted RBP11.02□□□□□ -0.65
MSH6-201ENST00000234420 SLC2A14Q8TDB8 520 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 LMX1AQ8TE12 382 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 TMEM176AQ96HP8 235 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 CCNL2Q96S94 520 aaPredicted RBP11.02□□□□□ -0.65
MSH6-201ENST00000234420 FEM1AQ9BSK4 669 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 PCDH9Q9HC56 1237 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 GDF3Q9NR23 364 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 CFAP97Q9P2B7 532 aa11.02□□□□□ -0.65
MSH6-201ENST00000234420 CCNB1P14635 433 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 OR1D2P34982 312 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 PAQR7Q86WK9 346 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 LRRC46Q96FV0 321 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 RETREG1Q9H6L5 497 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 PLEKHA1Q9HB21 404 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 AP3M1Q9Y2T2 418 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 ROBO2Q9HCK4 1378 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 CPSF4LA6NMK7 179 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 DISC1C4P0D8 188 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 PEX12O00623 359 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 RAB27AP51159 221 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 EIF5AP63241 154 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 SRYQ05066 204 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SSX2Q16385 188 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 AADATQ8N5Z0 425 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 TSEN15Q8WW01 171 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 PGM2Q96G03 612 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 HIST1H2AAQ96QV6 131 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 TSNAXQ99598 290 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 WDR77Q9BQA1 342 aaPredicted RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 SMURF1Q9HCE7 757 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 BTRCQ9Y297 605 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 MAGEB16A2A368 324 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 GSC2O15499 205 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 REM1O75628 298 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 RECQL4O94761 1208 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 EPHA3P29320 983 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 GDI1P31150 447 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 PDK2Q15119 407 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 WSCD1Q658N2 575 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 ATCAYQ86WG3 371 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SPPL2CQ8IUH8 684 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SLC41A1Q8IVJ1 513 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 GPALPP1Q8IXQ4 340 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SLC37A3Q8NCC5 494 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 DNASE1L2Q92874 299 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 TBC1D17Q9HA65 648 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 ADGRE2Q9UHX3 823 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SPATA31A1Q5TZJ5 1347 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 CENPBD1B2RD01 187 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 L7N2F9 121 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 PRAMEF1O95521 474 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SERPINA6P08185 405 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 DMWDQ09019 674 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 SMARCB1Q12824 385 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 GPM6BQ13491 265 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 KRBOX4Q5JUW0 171 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 FAM46CQ5VWP2 391 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 OR4A15Q8NGL6 344 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 POLMQ9NP87 494 aaPredicted RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 ARL8BQ9NVJ2 186 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 CNOT6Q9ULM6 557 aaKnown RBP11.01□□□□□ -0.65
MSH6-201ENST00000234420 EFCAB9A8MZ26 197 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 J3QRK9 145 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 MT-ND1P03886 318 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 JUPP14923 745 aa11.01□□□□□ -0.65
MSH6-201ENST00000234420 UQCRC1P31930 480 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms