RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 LINGO4Q6UY18 593 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 LDB1Q86U70 411 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 MSL3Q8N5Y2 521 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ZNF433Q8N7K0 673 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 TNFRSF25Q93038 417 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 LMLNQ96KR4 655 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 MTRRQ9UBK8 725 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 PRKAB1Q9Y478 270 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 RNASEH2AO75792 299 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 SIM2Q14190 667 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 IL23RQ5VWK5 629 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 THAP5Q7Z6K1 395 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 GPR65Q8IYL9 337 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 PLD5Q8N7P1 536 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 HM13Q8TCT9 377 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 NMUR2Q9GZQ4 415 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CIDEBQ9UHD4 219 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 DGKBQ9Y6T7 804 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 TRBV23OR9-2A0A075B6M9 112 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CBFA2T3O75081 653 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 LCA5LO95447 670 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ANXA4P09525 319 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 LAMP2P13473 410 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ALAS2P22557 587 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ACAP2Q15057 778 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 INTS6LQ5JSJ4 861 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 GALNT13Q8IUC8 556 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 TRPM4Q8TD43 1214 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 IFT80Q9P2H3 777 aaPredicted RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 A0A0X1KG70 313 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CD48P09326 243 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 HTR7P34969 479 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 RPIAP49247 311 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 JAM2P57087 298 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CYP4F8P98187 520 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CLCQ05315 142 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 DEFB115Q30KQ5 88 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 DCST1Q5T197 706 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 SNX20Q7Z614 316 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CFAP206Q8IYR0 622 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 SPOCK2Q92563 424 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 GSDMCQ9BYG8 508 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 TLE6Q9H808 572 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 TCAF1Q9Y4C2 921 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 FER1L4A9Z1Z3 1794 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 RIIAD1A6NNX1 92 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 PRAMEF1O95521 474 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ICAM3P32942 547 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 WASP42768 502 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 CCR10P46092 362 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 HSPA7P48741 367 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 POU5F1Q01860 360 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 GBE1Q04446 702 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ECHDC2Q86YB7 292 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 ATP6V1C2Q8NEY4 427 aa11.45□□□□□ -0.58
LAMA4-201ENST00000230538 WRAP53Q9BUR4 548 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 DHX33Q9H6R0 707 aaKnown RBP11.45□□□□□ -0.58
LAMA4-201ENST00000230538 A0A1W2PQ67 120 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 RGS20O76081 388 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CCR3P51677 355 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ROR2Q01974 943 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 DUSP28Q4G0W2 176 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ANKRD22Q5VYY1 191 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CERS6Q6ZMG9 384 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CLNKQ7Z7G1 428 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 TMEM139Q8IV31 216 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 MCEMP1Q8IX19 187 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ATAD1Q8NBU5 361 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 METTL21AQ8WXB1 218 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 DGCR14Q96DF8 476 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 TPK1Q9H3S4 243 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 NKIRAS2Q9NYR9 191 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 RAB26Q9ULW5 256 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 MYO5BQ9ULV0 1848 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CDKN2BP42772 138 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 LIPEQ05469 1076 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 PGAM4Q8N0Y7 254 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ARL10Q8N8L6 244 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 FAM13CQ8NE31 585 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 OR14C36Q8NHC7 312 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CPT1BQ92523 772 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 C11orf24Q96F05 449 aaPredicted RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 KLHL32Q96NJ5 620 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 ATG10Q9H0Y0 220 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CAPN8A6NHC0 703 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 RSL1D1O76021 490 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 NFATC1O95644 943 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 IFNW1P05000 195 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 EPHX1P07099 455 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 THRBP10828 461 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 MAPK12P53778 367 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 CDH4P55283 916 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 PLEKHG4Q58EX7 1191 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 HGSNATQ68CP4 663 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 UNC5BQ8IZJ1 945 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 LIX1Q8N485 282 aa11.44□□□□□ -0.58
LAMA4-201ENST00000230538 RBM15BQ8NDT2 890 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 SRFBP1Q8NEF9 429 aaKnown RBP11.44□□□□□ -0.58
LAMA4-201ENST00000230538 OR52J3Q8NH60 311 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms