RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 DDIT4Q9NX09 232 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 CMTM6Q9NX76 183 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 GIN1Q9NXP7 522 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 GMIPQ9P107 970 aa20.37■□□□□ 0.85
SNX3-201ENST00000230085 HEMK1Q9Y5R4 338 aaPredicted RBP20.37■□□□□ 0.85
SNX3-201ENST00000230085 PATJQ8NI35 1801 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 SAC3D1A6NKF1 404 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 GIPC1O14908 333 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 SEC14L2O76054 403 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 IGLV3-25P01717 112 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 HNRNPA1P09651 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
SNX3-201ENST00000230085 NELFEP18615 380 aaKnown RBP20.36■□□□□ 0.85
SNX3-201ENST00000230085 EPHB3P54753 998 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 C21orf59P57076 290 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 EEFSECP57772 596 aaKnown RBP20.36■□□□□ 0.85
SNX3-201ENST00000230085 PRAMEP78395 509 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 POU6F1Q14863 301 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 AASDHQ4L235 1098 aaPredicted RBP20.36■□□□□ 0.85
SNX3-201ENST00000230085 AARS2Q5JTZ9 985 aaKnown RBP20.36■□□□□ 0.85
SNX3-201ENST00000230085 AFMIDQ63HM1 303 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 ANKRD26P1Q6NSI1 321 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 TIGD7Q6NT04 549 aaPredicted RBP20.36■□□□□ 0.85
SNX3-201ENST00000230085 NIPAL1Q6NVV3 410 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 ZNF773Q6PK81 442 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 PRR23BQ6ZRT6 265 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 C8orf48Q96LL4 319 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 PHF12Q96QT6 1004 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 C1orf50Q9BV19 199 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 WDCPQ9H6R7 721 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 PRDM6Q9NQX0 595 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 HCFC1R1Q9NWW0 138 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 PKD2L2Q9NZM6 624 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 MIA3Q5JRA6 1907 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 C2orf16Q68DN1 1984 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 SYNJ2BP-COX16A0A087WUM0 186 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 ARPC2O15144 300 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 SLC7A4O43246 635 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 SULT1C4O75897 302 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 DNAJB5O75953 348 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 UNC50Q53HI1 259 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 MANEALQ5VSG8 457 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 KANK2Q63ZY3 851 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 OR9I1Q8NGQ6 314 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 OSCP1Q8WVF1 389 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 HDAC10Q969S8 669 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 ACDQ96AP0 544 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 LRRC58Q96CX6 371 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 RDH12Q96NR8 316 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 FICDQ9BVA6 458 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 MUC3BQ9H195 1237 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 AKTIPQ9H8T0 292 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 COX16Q9P0S2 106 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 OAZ3Q9UMX2 235 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 VWA7Q9Y334 891 aa20.36■□□□□ 0.85
SNX3-201ENST00000230085 FUOMA2VDF0 154 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 ANGPT2O15123 496 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 MAFKO60675 156 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PRSS23O95084 383 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PRR35P0CG20 571 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 RPS9P46781 194 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 SUOXP51687 545 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PGGT1BP53609 377 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PLD1Q13393 1074 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 CRY1Q16526 586 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 RBM20Q5T481 1227 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 BLOC1S3Q6QNY0 202 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 DNAJB7Q7Z6W7 309 aaPredicted RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 ISCA2Q86U28 154 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 SMRP1Q8NCR6 262 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 RHEBL1Q8TAI7 183 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 DQX1Q8TE96 717 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 RAB2BQ8WUD1 216 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 SMG7Q92540 1137 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 TANKQ92844 425 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PSMG2Q969U7 264 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 MAGED4Q96JG8 741 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 PAIP1Q9H074 479 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 POLR1BQ9H9Y6 1135 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 UBP1Q9NZI7 540 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 DNMT3BQ9UBC3 853 aaKnown RBP20.35■□□□□ 0.85
SNX3-201ENST00000230085 SEPT3Q9UH03 358 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 COQ6Q9Y2Z9 468 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 GREB1Q4ZG55 1949 aa20.35■□□□□ 0.85
SNX3-201ENST00000230085 NYNRINQ9P2P1 1898 aaKnown RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 ANKRD36A6QL64 1941 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 RNF103-CHMP3A0A140T963 221 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 HHLA1C9JL84 531 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 XYLBO75191 536 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 PAPLNO95428 1278 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 MBL2P11226 248 aaPredicted RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 CAPN3P20807 821 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 YWHAQP27348 245 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 TNK2Q07912 1038 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 NFATC3Q12968 1075 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 HECTD2Q5U5R9 776 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 GPRIN1Q7Z2K8 1008 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 GRASPQ7Z6J2 395 aaPredicted RBP20.34■□□□□ 0.85
SNX3-201ENST00000230085 GPR149Q86SP6 731 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 ATPAF2Q8N5M1 289 aa20.34■□□□□ 0.85
SNX3-201ENST00000230085 SPATA22Q8NHS9 363 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms