RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 ALDOCP09972 364 aaKnown RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 SPATA31D3P0C874 917 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 PRR35P0CG20 571 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 CTPS1P17812 591 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 XRCC1P18887 633 aaPredicted RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 DPP6P42658 865 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 TRIM25Q14258 630 aaKnown RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 CDKN3Q16667 212 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 RARS2Q5T160 578 aaKnown RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 IRAK1BP1Q5VVH5 260 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 PTRHD1Q6GMV3 140 aaKnown RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 RNF111Q6ZNA4 994 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 SPATA31D4Q6ZUB0 917 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 PDSS2Q86YH6 399 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 DDIASQ8IXT1 998 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 HS6ST3Q8IZP7 471 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 EFCAB3Q8N7B9 438 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 KREMEN2Q8NCW0 462 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 PIP4K2CQ8TBX8 421 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 LMLNQ96KR4 655 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 BTBD9Q96Q07 612 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 ZNF382Q96SR6 550 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 HGH1Q9BTY7 390 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 EMILIN2Q9BXX0 1053 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 SDR39U1Q9NRG7 319 aaPredicted RBP16.66■□□□□ 0.26
GAPDH-201ENST00000229239 RIC8BQ9NVN3 520 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 CD274Q9NZQ7 290 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 KLHL42Q9P2K6 505 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 ADAMTS6Q9UKP5 1117 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 HS3ST2Q9Y278 367 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 PPIL1Q9Y3C6 166 aa16.66■□□□□ 0.26
GAPDH-201ENST00000229239 C1orf232A0A0U1RR37 186 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 LRRC14BA6NHZ5 514 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 GRM6O15303 877 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 PRAMEF12O95522 483 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 CXCL14O95715 111 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 S100BP04271 92 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 SPAM1P38567 509 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 ERFP50548 548 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 FOXM1Q08050 763 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 NFATC2Q13469 925 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 PCBP2Q15366 365 aaKnown RBP eCLIP16.65■□□□□ 0.265e-7■■■■■ 27.1
GAPDH-201ENST00000229239 KIF19Q2TAC6 998 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 SERPINA9Q86WD7 417 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 KLHL23Q8NBE8 558 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 HIPK4Q8NE63 616 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 TUBGCP3Q96CW5 907 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 LRGUKQ96M69 825 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 CEP44Q9C0F1 390 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 TUBB1Q9H4B7 451 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 SEMA4BQ9NPR2 832 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 GID8Q9NWU2 228 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 GEMIN8Q9NWZ8 242 aaKnown RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 ADA2Q9NZK5 511 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 POLG2Q9UHN1 485 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 IRAK3Q9Y616 596 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 ATP6AP2A0A1C7CYW4 349 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 A6NHS1 94 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 PPP6CO00743 305 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 GAPDHSO14556 408 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 TRIM24O15164 1050 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 ATP6AP2O75787 350 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 SMNDC1O75940 238 aaKnown RBP eCLIP16.65■□□□□ 0.263e-6■■■■□ 26.7
GAPDH-201ENST00000229239 ACRV1P26436 265 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 CA8P35219 290 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 HNF1BP35680 557 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 CLCN2P51788 898 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 FOXA1P55317 472 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 RPS6KA2Q15349 733 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 TGFBIQ15582 683 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 XKR7Q5GH72 579 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 OGFRL1Q5TC84 451 aaPredicted RBP16.65■□□□□ 0.26
GAPDH-201ENST00000229239 MACC1Q6ZN28 852 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 GPRIN3Q6ZVF9 776 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 PAF1Q8N7H5 531 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 LMAN2LQ9H0V9 348 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 ASB8Q9H765 288 aa16.65■□□□□ 0.26
GAPDH-201ENST00000229239 NCOR1O75376 2440 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 GLYATL1P3A0A0U1RQE8 302 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 A0A1W2PRU2 124 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 DYTNA2CJ06 578 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 E2F3O00716 465 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 RAD51BO15315 384 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 ZNF821O75541 412 aaPredicted RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 DGKAP23743 735 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 CD70P32970 193 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 HK3P52790 923 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 PTPRRQ15256 657 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 TRIP10Q15642 601 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 PITRM1Q5JRX3 1037 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 TTC23LQ6PF05 361 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 FAM151BQ6UXP7 276 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 FRA10AC1Q70Z53 315 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 SYVN1Q86TM6 617 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 FUNDC1Q8IVP5 155 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 BHLHE22Q8NFJ8 381 aaPredicted RBP16.64■□□□□ 0.25
GAPDH-201ENST00000229239 ADCY4Q8NFM4 1077 aa16.64■□□□□ 0.25
GAPDH-201ENST00000229239 BHMTQ93088 406 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms