RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 CACNA2D2Q9NY47 1150 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 EPS15L1Q9UBC2 864 aa11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
TNFAIP1-201ENST00000226225 SAC3D1A6NKF1 404 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 TMEM233B4DJY2 109 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RNASEH2AO75792 299 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ATXN1LP0C7T5 689 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 HOXB8P17481 243 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 NME5P56597 212 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 SLC12A1Q13621 1099 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RUNX3Q13761 415 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 CEACAM7Q14002 265 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 NCEH1Q6PIU2 408 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 FGF14Q92915 247 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 SERPINI1Q99574 410 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RBBP8Q99708 897 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RETREG1Q9H6L5 497 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ASB8Q9H765 288 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 WDR41Q9HAD4 459 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 NSMCE4AQ9NXX6 385 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 MARCH4Q9P2E8 410 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 COPG2Q9UBF2 871 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 PAIP2BQ9ULR5 123 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF232Q9UNY5 417 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ERVW-1Q9UQF0 538 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 FAM149AA5PLN7 773 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 OTOL1A6NHN0 477 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RHOBTB1O94844 696 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 CD160O95971 181 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 C2P06681 752 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 THRAP10827 490 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 MESP2Q0VG99 397 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ADGRE1Q14246 886 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ZNF789Q5FWF6 425 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 USP45Q70EL2 814 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 CHST15Q7LFX5 561 aaPredicted RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 CCDC28BQ9BUN5 200 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 POMKQ9H5K3 350 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 SELENONQ9NZV5 590 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 AURKCQ9UQB9 309 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ACOT9Q9Y305 439 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 LOC285095A0A1B0GVY8 99 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 PLOD2O00469 737 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 STK25O00506 426 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 GLRA3O75311 464 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 LEFTY1O75610 366 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 EPOP01588 193 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 JUNP05412 331 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 CCDC166P0CW27 439 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 UGT1A6P19224 532 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 UGT1A1P22309 533 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 UGT1A4P22310 534 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 AKT1P31749 480 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 UGT1A3P35503 534 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 UGT1A5P35504 534 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 MAPK8P45983 427 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ARTNQ5T4W7 220 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 OGFOD2Q6N063 350 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 MARVELD2Q8N4S9 558 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 ACVR1CQ8NER5 493 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 SREK1Q8WXA9 508 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 BTBD9Q96Q07 612 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 OMDQ99983 421 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 HEPHQ9BQS7 1158 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 NOL11Q9H8H0 719 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 GMPR2Q9P2T1 348 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 RBMX2Q9Y388 322 aaKnown RBP11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 OR51B4Q9Y5P0 310 aa11.6□□□□□ -0.55
TNFAIP1-201ENST00000226225 J3QRK9 145 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 GIPC1O14908 333 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 GSRP00390 522 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CNTFP26441 200 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 LIMK2P53671 638 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 NR1H2P55055 460 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 STEAP4Q687X5 459 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 KIAA0930Q6ICG6 404 aaPredicted RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 TSPAN33Q86UF1 283 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 MDGA1Q8NFP4 955 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 STYXQ8WUJ0 223 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 FBXL8Q96CD0 374 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 ALG14Q96F25 216 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 RHOJQ9H4E5 214 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 V9GYQ6 96 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CACNG3O60359 315 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 TRIM16O95361 564 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 C1QAP02745 245 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 TIE1P35590 1138 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 CDKN1CP49918 316 aaPredicted RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 NSUN2Q08J23 767 aaKnown RBP eCLIP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 PTPRNQ16849 979 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 RBM20Q5T481 1227 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 FAM91A1Q658Y4 838 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 PTRHD1Q6GMV3 140 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 RPS27LQ71UM5 84 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 ADGRG6Q86SQ4 1221 aa11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
TNFAIP1-201ENST00000226225 FAM47BQ8NA70 645 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms