RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PRKCIP41743 596 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 RPIAP49247 311 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TAS2R50P59544 299 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 SATL1Q86VE3 508 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 SLC9A9Q8IVB4 645 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TSTD1Q8NFU3 115 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TWIST2Q8WVJ9 160 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 HMGB4Q8WW32 186 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 C1GALT1C1Q96EU7 318 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 RPL10LQ96L21 214 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 PDZD7Q9H5P4 517 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 IFT46Q9NQC8 304 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 DCCP43146 1447 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TSPAN1O60635 241 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ZNF432O94892 652 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 FABP3P05413 133 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 RHOQP17081 205 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 RYKP34925 604 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CDK9P50750 372 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 IL18R1Q13478 541 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 IL17AQ16552 155 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TIGD2Q4W5G0 525 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ABHD15Q6UXT9 468 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CHERPQ8IWX8 916 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 OR2T12Q8NG77 320 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 NKD1Q969G9 470 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ART5Q96L15 291 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 INTS10Q9NVR2 710 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 MIOSQ9NXC5 875 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 NUDT4Q9NZJ9 180 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TIMM22Q9Y584 194 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 PCDHB11Q9Y5F2 797 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 MST1RQ04912 1400 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 C5orf60A6NFR6 353 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CPSF4LA6NMK7 179 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 KMOO15229 486 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 INSIG1O15503 277 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 DHX15O43143 795 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 HCN1O60741 890 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 NOS1APO75052 506 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 LDOC1O95751 146 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CEBPGP53567 150 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 PPP3R1P63098 170 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TLR1Q15399 786 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 BBS12Q6ZW61 710 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 NUP54Q7Z3B4 507 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 SERPINA9Q86WD7 417 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 SIDT2Q8NBJ9 832 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 OR7D4Q8NG98 312 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CSPG4P5Q96PW8 444 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TCRBV9S1A1TA0A576 114 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 SYN3O14994 580 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 NDST3O95803 873 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CASP7P55210 303 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ABATP80404 500 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TRAP1Q12931 704 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 KCTD19Q17RG1 926 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 A0A1W2PRG6 482 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ITGB3BPQ13352 177 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 AUHQ13825 339 aaKnown RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 HSDL1Q3SXM5 330 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 TEX44Q53QW1 395 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 FBXO48Q5FWF7 155 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 GDF6Q6KF10 455 aaPredicted RBP13.12□□□□□ -0.31
COL1A1-201ENST00000225964 CHID1Q9BWS9 393 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 LHX5Q9H2C1 402 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 ABCB8Q9NUT2 735 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 IL36AQ9UHA7 158 aa13.12□□□□□ -0.31
COL1A1-201ENST00000225964 KLRG2A4D1S0 409 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 BBIP1A8MTZ0 92 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 DUSP11O75319 330 aaKnown RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 C8AP07357 584 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GPM6BQ13491 265 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ZACNQ401N2 412 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 RANBP3LQ86VV4 465 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 MAML3Q96JK9 1138 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 FAM155BO75949 473 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 CLCN7P51798 805 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ELF3P78545 371 aaPredicted RBP13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ENPEPQ07075 957 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 MAPK14Q16539 360 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ECM1Q16610 540 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 RGS21Q2M5E4 152 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 LIX1Q8N485 282 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 MEIOBQ8N635 442 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 KCT2Q8NC54 265 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 IRGQQ8WZA9 623 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 RHOJQ9H4E5 214 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 C11orf49Q9H6J7 331 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GRIN2DO15399 1336 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ZNF823P16415 610 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ICAM3P32942 547 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 MPP1Q00013 466 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 GNA12Q03113 381 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 OR2L3Q8NG85 312 aa13.11□□□□□ -0.31
COL1A1-201ENST00000225964 EFHD2Q96C19 240 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms