RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 HIST1H2ABP04908 130 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 HOXB6P17509 224 aaKnown RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 IVDP26440 423 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 CDH5P33151 784 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 UGT2B15P54855 530 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 CHST9Q7L1S5 443 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 HIST3H2AQ7L7L0 130 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 FAM124AQ86V42 546 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 RALGPS2Q86X27 583 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 CPNE9Q8IYJ1 553 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 HIST1H2ACQ93077 130 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 FEM1CQ96JP0 617 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 HAPLN3Q96S86 360 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 RNF39Q9H2S5 420 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 SAMD4AQ9UPU9 718 aaKnown RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 SATB2Q9UPW6 733 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 ZNF780BQ9Y6R6 833 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 A8MUI8 341 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 CA12O43570 354 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 LGR5O75473 907 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 RGS20O76081 388 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 NFATC1O95644 943 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 ZNF132P52740 706 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 CYP4F2P78329 520 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 C9orf64Q5T6V5 341 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 PRSS55Q6UWB4 352 aaPredicted RBP11.42□□□□□ -0.58
NOD1-201ENST00000222823 RNF44Q7L0R7 432 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 SPPL2CQ8IUH8 684 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 KLHL23Q8NBE8 558 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 UXS1Q8NBZ7 420 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 HTATIP2Q9BUP3 242 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 PDLIM7Q9NR12 457 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 BTBD3Q9Y2F9 522 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 AK5Q9Y6K8 562 aa11.42□□□□□ -0.58
NOD1-201ENST00000222823 MAP1BP46821 2468 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 COL5A3P25940 1745 aaPredicted RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 SLC28A2O43868 658 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 MFN2O95140 757 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 EPHX1P07099 455 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 SCNN1AP37088 669 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 WASP42768 502 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ASMTP46597 345 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PRKCZQ05513 592 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 SF1Q15637 639 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 SERPINA9Q86WD7 417 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PPP1R14AQ96A00 147 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 RPL10LQ96L21 214 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 MCMBPQ9BTE3 642 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 C3orf14Q9HBI5 128 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 NUDT4Q9NZJ9 180 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ZMYND8Q9ULU4 1186 aaPredicted RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 FCF1Q9Y324 198 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 CCDC189A1A4V9 331 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 C9JVG2 144 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 FZD9O00144 591 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 SEC24AO95486 1093 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 FGBP02675 491 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 DBTP11182 482 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 JAK1P23458 1154 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PTGER3P43115 390 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 NRLP54845 237 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 SLC25A11Q02978 314 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 OR2T34Q8NGX1 318 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 OR2T3Q8NH03 318 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ZHX1-C8orf76Q96EF9 292 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 TEFMQ96QE5 360 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 FCRL5Q96RD9 977 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 MRPS33Q9Y291 106 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 CHURC1-FNTBB4DL54 471 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ASNA1O43681 348 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 HLA-DQA2P01906 255 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 RPL4P36578 427 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 GPR107Q5VW38 600 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 DEF8Q6ZN54 512 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 REM2Q8IYK8 340 aaPredicted RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 PHC3Q8NDX5 983 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ESAMQ96AP7 390 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 UNC93B1Q9H1C4 597 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ADAM7Q9H2U9 754 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 MFSD1Q9H3U5 465 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 CCNB1IP1Q9NPC3 277 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 SPATA2Q9UM82 520 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PRRC2BQ5JSZ5 2229 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 G3V2T6 193 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PER2O15055 1255 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 TSC22D2O75157 780 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 OR4F21O95013 312 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 IL6P05231 212 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 CAPN1P07384 714 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 NR2F6P10588 404 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 UROSP10746 265 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 PRG2P13727 222 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 CDK9P50750 372 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 RPS24P62847 133 aaKnown RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 CYP4F3Q08477 520 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 ZNF460Q14592 562 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 CCL14Q16627 93 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 RFTN2Q52LD8 501 aaPredicted RBP11.41□□□□□ -0.58
NOD1-201ENST00000222823 PHYKPLQ8IUZ5 450 aa11.41□□□□□ -0.58
NOD1-201ENST00000222823 C2orf73Q8N5S3 287 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms