RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 CLASP2O75122 1294 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 ECI2O75521 394 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 THRAP10827 490 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 CSRP3P50461 194 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ZNF140P52738 457 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 FASTKQ14296 549 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 GRB7Q14451 532 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 RBBP7Q16576 425 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ZNF678Q5SXM1 525 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 FBXO39Q8N4B4 442 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 KYQ8NBH2 561 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 C2orf15Q8WU43 125 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 PLD4Q96BZ4 506 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 WDR41Q9HAD4 459 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 DKK3Q9UBP4 350 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 SLCO3A1Q9UIG8 710 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 KLF15Q9UIH9 416 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 SCOCQ9UIL1 159 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 DOLKQ9UPQ8 538 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 HCFC2Q9Y5Z7 792 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 USP34Q70CQ2 3546 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 H2AFYO75367 372 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 MTX2O75431 263 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 PAPSS2O95340 614 aaPredicted RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 ZCCHC18P0CG32 403 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 FDXRP22570 491 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 RAP1GDS1P52306 607 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ADARP55265 1226 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 ERVFC1P60507 584 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 AP2B1P63010 937 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 TRIP10Q15642 601 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 TRMT5Q32P41 509 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 SGO1Q5FBB7 561 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 RNF111Q6ZNA4 994 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 SPATA24Q86W54 205 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP11-201ENST00000218348 LRCH3Q96II8 777 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 MPP4Q96JB8 637 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 VPS50Q96JG6 964 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 RANBP9Q96S59 729 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 ADGRE3Q9BY15 652 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 EIF2B4Q9UI10 523 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 TRMT6Q9UJA5 497 aaKnown RBP9.87□□□□□ -0.83
USP11-201ENST00000218348 MED16Q9Y2X0 877 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 PKP3Q9Y446 797 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 TRIOO75962 3097 aa9.87□□□□□ -0.83
USP11-201ENST00000218348 NR5A2O00482 541 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 MAP3K7O43318 606 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 KDM1AO60341 852 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CDK14O94921 469 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 F11P03951 625 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 MTHFD2P13995 350 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 GLULP15104 373 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CR2P20023 1033 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 POU3F3P20264 500 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 CCR2P41597 374 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 GDF5P43026 501 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 MS4A2Q01362 244 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 LMAN2Q12907 356 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 RPS6KA2Q15349 733 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 TBCCQ15814 346 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 INAQ16352 499 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 SETMARQ53H47 684 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 PTRHD1Q6GMV3 140 aaKnown RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 NET1Q7Z628 596 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 IFNEQ86WN2 208 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 FIBCD1Q8N539 461 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ENDOVQ8N8Q3 282 aaKnown RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 LPGAT1Q92604 370 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CDK5RAP1Q96SZ6 601 aaKnown RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 LINC00597Q9H2U6 94 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ASB8Q9H765 288 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 IL21Q9HBE4 155 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ZDHHC4Q9NPG8 344 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 NLE1Q9NVX2 485 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 FNIP2Q9P278 1114 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 LHX3Q9UBR4 397 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ZMAT5Q9UDW3 170 aaKnown RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 ZMYM5Q9UJ78 669 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 NOX1Q9Y5S8 564 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ANKRD36A6QL64 1941 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 NEDD8-MDP1E9PL57 170 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 PEX2P28328 305 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CD97P48960 835 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 RAD51Q06609 339 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CEACAM7Q14002 265 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CAPRIN1Q14444 709 aaKnown RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 TAF1AQ15573 450 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 LILRA6Q6PI73 481 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 RAB44Q7Z6P3 723 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 C11orf74Q86VG3 221 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 TMEM25Q86YD3 366 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CCDC117Q8IWD4 279 aaPredicted RBP9.86□□□□□ -0.83
USP11-201ENST00000218348 CDYL2Q8N8U2 506 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 ATP6V1E2Q96A05 226 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 TADA1Q96BN2 335 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CNDP1Q96KN2 507 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 NKX2-4Q9H2Z4 354 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 AKTIPQ9H8T0 292 aa9.86□□□□□ -0.83
USP11-201ENST00000218348 CERS4Q9HA82 394 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms