RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ADH1AP07327 375 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MYBP10242 640 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 DBPQ10586 325 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 POU4F2Q12837 409 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MTF1Q14872 753 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 MAP4K3Q8IVH8 894 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TM9SF2Q99805 663 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SYT15Q9BQS2 421 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 POMKQ9H5K3 350 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ASAH2Q9NR71 780 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PLCL2Q9UPR0 1127 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FAM237BA0A1B0GVD1 139 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 AQP12BA6NM10 295 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 IRAK2O43187 625 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GRID2O43424 1007 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PRH1P02810 166 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CTSEP14091 401 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FMO4P31512 558 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PLK1P53350 603 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SSTP61278 116 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 BAATQ14032 418 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 XKR4Q5GH76 650 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 VN1R5Q7Z5H4 357 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SLCO6A1Q86UG4 719 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZC3H7AQ8IWR0 971 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 AQP12AQ8IXF9 295 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 UBR7Q8N806 425 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 C8orf48Q96LL4 319 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OMDQ99983 421 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 LRRC3Q9BY71 257 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 RDH8Q9NYR8 311 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ACTR3BQ9P1U1 418 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 IGSF9Q9P2J2 1179 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 WASF3Q9UPY6 502 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ALG5Q9Y673 324 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 GNALP38405 381 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SCNN1GP51170 649 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SPIBQ01892 262 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CRHR2Q13324 411 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 NUP54Q7Z3B4 507 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ANKRD52Q8NB46 1076 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZKSCAN4Q969J2 545 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PPCDCQ96CD2 204 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 STUB1Q9UNE7 303 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SMCHD1A6NHR9 2005 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CYP27B1O15528 508 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 NARSO43776 548 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 HOXB9P17482 250 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 IGFBP5P24593 272 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 NSG1P42857 185 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SRP54P61011 504 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TGFB2P61812 414 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ACTC1P68032 377 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ACTA1P68133 377 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 BTKQ06187 659 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 HSD17B12Q53GQ0 312 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 CMTR2Q8IYT2 770 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF709Q8N972 641 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ZNF354BQ96LW1 612 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 AGO4Q9HCK5 861 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PXMP2Q9NR77 195 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PNMA8BQ9ULN7 279 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 DHX15O43143 795 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 LATO43561 262 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 NPHS1O60500 1241 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FAM163BP0C2L3 166 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 SLC35G6P0C7Q6 338 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 YAP1P46937 504 aaKnown RBP6.03□□□□□ -1.44
VPS13D-201ENST00000011700 KHKP50053 298 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PRMT2P55345 433 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 FAXCQ5TGI0 409 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 PLPPR4Q7Z2D5 763 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 TNS4Q8IZW8 715 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 WDR48Q8TAF3 677 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 THAP6Q8TBB0 222 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 UNC93B1Q9H1C4 597 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 ETNK2Q9NVF9 386 aa6.03□□□□□ -1.44
VPS13D-201ENST00000011700 OAZ2O95190 189 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 PGRP06401 933 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 GNAO1P09471 354 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 CD247P20963 164 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 CAP2P40123 477 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 THPOP40225 353 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 NR4A2P43354 598 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 RGS7P49802 495 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 CTBP2P56545 445 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 CCNIQ14094 377 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 DGCR6Q14129 220 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 PROSER3Q2NL68 480 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 OR51D1Q8NGF3 324 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 DIRAS2Q96HU8 199 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 PNKPQ96T60 521 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 V9GYQ6 96 aa6.02□□□□□ -1.44
VPS13D-201ENST00000011700 COL14A1Q05707 1796 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 STK16O75716 305 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 RNH1P13489 461 aaKnown RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 TLE3Q04726 772 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 EFEMP1Q12805 493 aa6.02□□□□□ -1.45
VPS13D-201ENST00000011700 FAM199XQ6PEV8 388 aaPredicted RBP6.02□□□□□ -1.45
VPS13D-201ENST00000011700 OXER1Q8TDS5 423 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms