RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Abhd11Q8K4F5 307 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lgals12Q91VD1 314 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 TmlheQ91ZE0 421 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Riok3Q9DBU3 519 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 AicdaQ9WVE0 198 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm28168A0A087WNP1 180 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Vmn1r2A2AMT6 306 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cd19P25918 547 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pabpc1P29341 636 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 TigitP86176 249 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Q32M26 199 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hipk4Q3V016 616 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cabcoco1Q8CDT7 208 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr1208Q8VG47 308 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Vps11Q91W86 941 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dus2Q9D7B1 493 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 CtsrQ9JIA9 334 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdh13Q9WTR5 714 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gbp2Q9Z0E6 589 aa15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Bag6Q9Z1R2 1154 aaKnown RBP15.73■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam209A2APA5 170 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mtx3D3YTP3 312 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Gm3526E9PZM0 191 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fam71e2L7N480 754 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 RhoP15409 348 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 M6prP24668 278 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pfdn6Q03958 127 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Krt73Q6NXH9 539 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sema3dQ8BH34 777 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cnpy4Q8BQ47 245 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 GcshQ91WK5 170 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 AslQ91YI0 464 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Prpf19Q99KP6 504 aaKnown RBP15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Necab3Q9D6J4 353 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tdrd6P61407 2134 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Foxm1O08696 760 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Galnt1O08912 559 aaKnown RBP15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Pebp1P70296 187 aaKnown RBP15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 OsgepQ8BWU5 335 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fbxo48Q8CAT8 161 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Kremen2Q8K1S7 461 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Rnf111Q99ML9 989 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ephx1Q9D379 455 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Tmem245B1AZA5 876 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Armc4B2RY50 1037 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 GmlE9PX31 176 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Erich1E9PY43 332 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Kcnj9P48543 393 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cpne9Q1RLL3 553 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mocs1Q5RKZ7 636 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 BadQ61337 204 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hspa1aQ61696 641 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Stk32aQ8BGW6 398 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lyve1Q8BHC0 318 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 4932414N04RikQ8CEQ9 752 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Camk1Q91YS8 374 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ppp6cQ9CQR6 305 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Toe1Q9D2E2 511 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Fzd2Q9JIP6 570 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Hey2Q9QUS4 339 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Krt6bQ9Z331 562 aa15.72■□□□□ 0.11
Trim39-203ENSMUST00000113706 Olfr566A0A1B0GST0 319 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Mgat4eA6H684 439 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Skint1A7TZE6 364 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Sec22bO08547 215 aaKnown RBP15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 WarsP32921 481 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cntn5P68500 1098 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Zfyve27Q3TXX3 415 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Glb1l2Q3UPY5 636 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ermp1Q3UVK0 898 aaKnown RBP15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ppm1hQ3UYC0 513 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dtd2Q8BHA3 168 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Adipor2Q8BQS5 386 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Upk1aQ9D132 257 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Syvn1Q9DBY1 612 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Ighv11-1A0A075B5R6 117 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 NuggcD3YWJ0 796 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Dennd1bQ3U1T9 766 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Nfatc2Q60591 927 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Creb3Q61817 404 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Naif1Q6PFD7 327 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Elp6Q8BK75 266 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Znf385bQ8BXJ8 482 aaKnown RBP15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Lrrtm3Q8BZ81 582 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Stk-ps2Q8C0V7 499 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Slc46a2Q8CA03 479 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Clptm1Q8VBZ3 664 aa15.71■□□□□ 0.11
Trim39-203ENSMUST00000113706 Cdh23Q99PF4 3354 aa15.71■□□□□ 0.1
Trim39-203ENSMUST00000113706 Rundc3aO08576 446 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Sypl1O09117 261 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 RpsaP14206 295 aaKnown RBP15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Ptger3P30557 365 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Fdft1P53798 416 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Ybx1P62960 322 aaKnown RBP15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Arhgef15Q5FWH6 849 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Slc6a3Q61327 619 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Znf750Q8BH05 703 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Clasp2Q8BRT1 1286 aaKnown RBP15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 Lrrc3bQ8VCH9 259 aa15.7■□□□□ 0.1
Trim39-203ENSMUST00000113706 ApofQ91V80 315 aa15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms