RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Olfr169Q7TS53 313 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 B3gnt7Q8K0J2 397 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Myoz3Q8R4E4 245 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc35a5Q921R7 437 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Hnrnpa0Q9CX86 305 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tbc1d21Q9D9D3 336 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 IcmtQ9EQK7 283 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cngb3Q9JJZ9 694 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 GabrqQ9JLF1 638 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam209A2APA5 170 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Klhl4B1AZR0 717 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 2310061I04RikB8JJ69 315 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sod3O09164 251 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cyp27b1O35084 507 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Anxa6P14824 673 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc2a3P32037 493 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pip5k1bP70181 539 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Clec4b1Q7TS58 209 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam221bQ8C627 487 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Lrrc66Q8K0B3 872 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Trpv3Q8K424 791 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Stk32cQ8QZV4 488 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 HnrnpabQ99020 285 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Snx7Q9CY18 387 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tnfrsf21Q9EPU5 655 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Rsc1a1Q9ER99 582 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gjd2O54851 321 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Usp39Q3TIX9 564 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nutm2Q3V0C3 733 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 B3gnt3Q5JCS9 372 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 MogQ61885 246 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Six3Q62233 333 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr1046Q7TR79 316 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr299Q7TS05 330 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vac14Q80WQ2 782 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tgm6Q8BM11 706 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Kansl2Q8BQR4 486 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 GrpQ8R1I2 146 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pycr2Q922Q4 320 aaKnown RBP15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 PrkxQ922R0 355 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Lgals2Q9CQW5 130 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mrps33Q9D2R8 106 aa15.41■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Scn3aA2ASI5 1947 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Slc4a5E9Q3M5 1116 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r57L7N269 863 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Svs4P18419 113 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mansc4Q3UU94 337 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sdr16c5Q7TQA3 309 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cyth4Q80YW0 393 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 LnpepQ8C129 1025 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Smoc2Q8CD91 447 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mcm8Q9CWV1 833 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gemin6Q9CX53 166 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Olfr564E9PWA8 316 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 4930579F01RikE9Q3L6 325 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mapre3Q6PER3 281 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tmcc2Q80W04 706 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Fam83eQ80XS7 481 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm42417Q8K1D0 126 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mrto4Q9D0I8 239 aaKnown RBP15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cpxm2Q9D2L5 764 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Nos1apQ9D3A8 503 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cldn22Q9D7U6 220 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Arl10Q9QXJ4 243 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Khdrbs3Q9R226 346 aaKnown RBP15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Mad2l1Q9Z1B5 205 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sult2a7A0A1B0GRF0 313 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Sh3pxd2aO89032 1124 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Hpcal1P62748 193 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Spata48Q5NC83 441 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 PdgfrlQ6PE55 375 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cd300lfQ6SJQ7 337 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Got1l1Q7TSV6 404 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Aldh3b1Q80VQ0 468 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Cxcr1Q810W6 351 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Glod4Q9CPV4 298 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 CtsmQ9JL96 333 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Col22a1E9Q7P1 1613 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ltbp1Q8CG19 1712 aa15.4■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm21149A0A0G2JFY7 255 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ccdc149F6V035 524 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm12794L7MTS5 483 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Man2b1O09159 1013 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Il6raP22272 460 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 RxrbP28704 520 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Pabpc1P29341 636 aaKnown RBP15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tmem173Q3TBT3 378 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 CamkmtQ3U2J5 323 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 C1orf109Q499E6 217 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 IfneQ80ZF2 192 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Gm9758Q80ZT2 255 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Reep1Q8BGH4 201 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Npffr2Q924H0 417 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Ist1Q9CX00 362 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Tex44Q9DA60 530 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Adam17Q9Z0F8 827 aa15.39■□□□□ 0.06
Ccdc88b-201ENSMUST00000113440 Vmn2r103E9PWW0 856 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 PfkmP47857 780 aaKnown RBP15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Pex2P55098 305 aa15.39■□□□□ 0.05
Ccdc88b-201ENSMUST00000113440 Cdh5P55284 784 aa15.39■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 37.5 ms