RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Pnma8aQ80VM8 430 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gulp1Q8K2A1 304 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Pmf1Q9CPV5 202 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Ephx1Q9D379 455 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Ccdc88cQ6VGS5 2009 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Mkrn2osD3Z393 217 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 MntO08789 591 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Cpa3P15089 417 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Camk2bP28652 542 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Tbx4P70325 552 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 DsppP97399 934 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Q3U4G0 281 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Zfp759Q7M6X3 721 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Arhgap11aQ80Y19 987 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Zdhhc14Q8BQQ1 489 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gpr21Q8BX79 349 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Asrgl1Q8C0M9 326 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Zbtb6Q8K088 423 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gprc6aQ8K4Z6 928 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Kctd5Q8VC57 234 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Serpinb1bQ8VHP7 382 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Zfp61Q923D1 555 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Tdrd12Q9CWU0 1215 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dnase1l1Q9D7J6 314 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 FarsbQ9WUA2 589 aaKnown RBP9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Pik3c2bE9QAN8 1632 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Myh7Q91Z83 1935 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Adamts6D3Z1A5 1117 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gm16494E9Q2Z4 87 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gpr137cE9Q343 423 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Klhl33G3UW92 533 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Slc6a20bO88575 635 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 DbiP31786 87 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Epb42P49222 691 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Fbln1Q08879 705 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 HecaQ3V1N5 544 aaKnown RBP9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Mup20Q5FW60 181 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Bnip1Q6QD59 228 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Slc6a20aQ8VDB9 592 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gtf2h2Q9JIB4 396 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Mroh5E9PUJ8 762 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 NapsaO09043 419 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Slc22a2O70577 553 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Npr1P18293 1057 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Mpp1P70290 466 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gm6377Q8BHV4 303 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 R3hcc1lQ8BJM3 775 aaKnown RBP9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Hspbap1Q8BK58 483 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Acsl5Q8JZR0 683 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Slc3a1Q91WV7 685 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Q9CQC3 228 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dpysl5Q9EQF6 564 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dgat1Q9Z2A7 498 aa9.76□□□□□ -0.85
Syne1-201ENSMUST00000041639 Zfp105G3X9I0 524 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 TpmtO55060 240 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Pip5k1bP70181 539 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Ipcef1Q5DU31 406 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 PrkciQ62074 595 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Fgl1Q71KU9 314 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 MfrpQ8K480 584 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 HnrnpabQ99020 285 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 MpstQ99J99 297 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Izumo2Q9DA16 220 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 TrmuQ9DAT5 417 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Oxct2bQ9ESL0 520 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Oxct2aQ9JJN4 520 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dpp6Q9Z218 804 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Vmn2r17E9PYF5 849 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Ccdc149F6V035 524 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 GhrP16882 650 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Irf6P97431 467 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Pecam1Q08481 727 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Kbtbd8Q3UQV5 599 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Sf1Q64213 653 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Colgalt2Q6NVG7 625 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Ugt2a2Q6PDD0 528 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Olfr1505Q7TQQ2 316 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Parp12Q8BZ20 711 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Galnt18Q8K1B9 622 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Cops7aQ9CZ04 275 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Mrpl19Q9D338 292 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Actrt2Q9D9L5 377 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Smg9Q9DB90 520 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 4932443I19RikA0A286YE38 169 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gm340F6RGI3 1242 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Coro1aO89053 461 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 DctP29812 517 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 UtyP79457 1212 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Psg29Q3URN6 468 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dsg4Q7TMD7 1041 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 TdrpQ8C5P7 182 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 ScaiQ8C8N2 606 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Polr1eQ8K202 482 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Adgrg1Q8K209 687 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Lpin1Q91ZP3 924 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Npm3Q9CPP0 175 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 PglsQ9CQ60 257 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Dcun1d5Q9CXV9 237 aa9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Gys1Q9Z1E4 738 aaKnown RBP9.75□□□□□ -0.85
Syne1-201ENSMUST00000041639 Abca8aQ8K442 1620 aa9.75□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms