RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Igf2bp1O88477 577 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pcbp1P60335 356 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cdh6P97326 790 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cry1P97784 606 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Jmjd8Q3TA59 316 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Brms1lQ3U1T3 323 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zmym5Q3U2E2 627 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 SctrQ5FWI2 447 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Foxb2Q64733 428 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Chil6Q80W26 440 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 AftphQ80WT5 931 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 C2cd4bQ80XU5 340 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Slc16a12Q8BGC3 486 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 B430218F22RikQ8BQR5 223 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 CtbsQ8R242 366 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ccdc59Q8R2N0 240 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 DeraQ91YP3 318 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mrpl45Q9D0Q7 306 aaKnown RBP13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tspan11Q9D1D1 253 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dlgap1Q9D415 992 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Q9D5Y0 588 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pou5f2Q9DAC9 329 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pold3Q9EQ28 462 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Col11a1Q61245 1804 aa13.31□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmem131O70472 1877 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ighv11-2A0A075B5R8 117 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fam131cA2ADB2 273 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr1153A2AVC0 318 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp992B1ASD8 573 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Sec14l5B2RXM5 696 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 H2-M9O19442 342 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Cdk2ap1O35207 114 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lhx8O35652 367 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ptpn22P29352 802 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 B3gat3P58158 335 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lrrc3P59034 257 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pros1Q08761 675 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hk3Q3TRM8 922 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mrgprb1Q3UG61 350 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Thrap3Q569Z6 951 aaKnown RBP13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dpy19l3Q71B07 716 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp991Q8R1N3 573 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Olfr1250Q8VGM3 314 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Snx2Q9CWK8 519 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Clec2gQ9D676 269 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Oser1Q9D722 291 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 TrilQ9DBY4 809 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mbtps1Q9WTZ2 1052 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 A0A1L1ST33 502 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 D830030K20RikE9PYQ5 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm3043K7N693 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm16440K7N6G6 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm2244L7N2A3 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm3278L7N2D2 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Gm8271L7N2E2 218 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Hcn1O88704 910 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Htr5bP31387 370 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Nat1P50294 290 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Kcnj13P86046 360 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Npy2rP97295 381 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 SelpQ01102 768 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Bhlha9Q5RJB0 231 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Rbbp7Q60973 425 aaKnown RBP13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fgfr3Q61851 801 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pik3r3Q64143 461 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Tmtc4Q8BG19 741 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fignl1Q8BPY9 683 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fastkd3Q8BSN9 661 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Dapk2Q8VDF3 370 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Oas1cQ924S2 362 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 March2Q99M02 246 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mcm8Q9CWV1 833 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ccdc70Q9D9B0 223 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Yae1d1Q9DAY6 216 aa13.3□□□□□ -0.28
Nup88-201ENSMUST00000035283 Spin2gA0A0N4SW15 236 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Znf711A2ANX9 761 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Mroh7A2AVR2 1279 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 A6H6Q4 206 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 4930558K02RikE0CXC6 182 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp780bE9Q2S6 806 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Spin2eJ3QNQ0 234 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ppef1O35655 650 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 CfhP06909 1234 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Anxa6P14824 673 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Ifrd1P19182 449 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 F3P20352 294 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 SykP48025 629 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 AhcyP50247 432 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Serpinb5P70124 375 aaKnown RBP13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp39Q02525 718 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Zfp607aQ3TQG9 686 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Lmf1Q3U3R4 574 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Pfdn4Q3UWL8 134 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Srek1ip1Q4V9W2 153 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fnip1Q68FD7 1165 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 ChdhQ8BJ64 596 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Svs2Q8BS30 375 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 GmppbQ8BTZ7 360 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Asrgl1Q8C0M9 326 aa13.29□□□□□ -0.28
Nup88-201ENSMUST00000035283 Fbxo48Q8CAT8 161 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms