RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Srp54P14576 504 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Lamp2P17047 415 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 CatP24270 527 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Kir3dl1P83555 432 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 PmlQ60953 885 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Pik3r3Q64143 461 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Olfr1313Q7TQW8 311 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Q8BGK9 164 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Mrps35Q8BJZ4 320 aaKnown RBP16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Hddc3Q9D114 179 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Jam2Q9JI59 298 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 MarcoQ60754 518 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Olfr295Q7TS08 309 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Polr1eQ8K202 482 aaKnown RBP16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gulp1Q8K2A1 304 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 McmbpQ8R3C0 642 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Spatc1lQ9D9W0 342 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tysnd1Q9DBA6 568 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Htatip2Q9Z2G9 242 aa16.47■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm7792A0A0J9YU01 481 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tmem236A2ARJ3 344 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Fam155bA2BDP1 471 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm3183D3YUJ6 481 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm3139J3QK78 481 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gm3106J3QPH3 481 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Zfp457L7N1X4 647 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tmem165P52875 323 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Adamts10P58459 1104 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Npy2rP97295 381 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Cntn2Q61330 1040 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 HrQ61645 1182 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Dalrd3Q6PJN8 538 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Xylt1Q811B1 953 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 TympQ99N42 471 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Lpin3Q99PI4 848 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Paqr5Q9DCU0 330 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Aldh6a1Q9EQ20 535 aaKnown RBP16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ehd3Q9QXY6 535 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 DnpepQ9Z2W0 473 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 SmoktcrA2KF29 484 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Zfp651E9PZ11 729 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Kpna4O35343 521 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ap2m1P84091 435 aaKnown RBP16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Orm1Q60590 207 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Trappc6aQ78XR0 159 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Bcas3Q8CCN5 928 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 NoboxQ8VIH1 527 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Ankrd61Q9CQM6 421 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Themis3Q9CU24 569 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Prelid3bQ9CYY7 195 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Tomm20lQ9D4V6 152 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Cyp3a41aQ9JMA7 504 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 CtskP55097 329 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 CtscP97821 462 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Eml1Q05BC3 814 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Plpp4Q0VBU9 271 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Fam98aQ3TJZ6 515 aaKnown RBP16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Gdpd5Q640M6 607 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Teddm1bQ8CC62 306 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nsmce2Q91VT1 247 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Nck1Q99M51 377 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Chrna6Q9R0W9 494 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Dpp6Q9Z218 804 aa16.46■□□□□ 0.23
Ubfd1-201ENSMUST00000033158 Klhl4B1AZR0 717 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Gm20695H3BLK7 282 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Sept4P28661 478 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Aqp8P56404 261 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Pfkfb2P70265 519 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Eif2ak2Q03963 515 aaKnown RBP16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Nek10Q3UGM2 1111 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Clca4bQ3UW98 925 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Ppm1hQ3UYC0 513 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 MslnQ61468 625 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 GapdhsQ64467 440 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Pnma8aQ80VM8 430 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Rbm4Q8C7Q4 361 aaKnown RBP16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Acap1Q8K2H4 740 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Vmn1r24Q8R2D6 296 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Mcoln3Q8R4F0 553 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Rbm4bQ8VE92 357 aaKnown RBP16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Olfr665Q8VG79 316 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Pcdhac1Q91Y10 964 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Yipf2Q99LP8 312 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Smg9Q9DB90 520 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Nav1Q8CH77 1875 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Esp31A8R0W3 114 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Trim30bE9PVL6 203 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Serpine3E9Q6A2 401 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Gm17555F6U8B9 371 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Zfp607bG3X9H3 648 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 SpnP15702 395 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Cpne9Q1RLL3 553 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Coq10bQ3THF9 240 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Tnks2Q3UES3 1166 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Bcl2a1bQ497M6 172 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Spata48Q5NC83 441 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Olfr533Q7TRT7 320 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Acat2Q8CAY6 397 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 TrhdeQ8K093 1025 aa16.45■□□□□ 0.22
Ubfd1-201ENSMUST00000033158 Tbc1d21Q9D9D3 336 aa16.45■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms