RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 RbfaQ6P3B9 350 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Taf1cQ6PDZ2 836 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Wfikkn2Q7TQN3 571 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dnajc16Q80TN4 772 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cdkn3Q810P3 211 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Eme1Q8BJW7 570 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ces2aQ8QZR3 558 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 RorbQ8R1B8 470 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Olfr1414Q8VGU5 312 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rsph14Q9D3W1 341 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slco1c1Q9ERB5 715 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm15155B1B034 138 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc9a3G3X939 829 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pot1bH7BX60 640 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm6614M0QWR8 670 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rhox6O70238 227 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cxcr3O88410 367 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dnmt3cP0DOY1 709 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cdh2P15116 906 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 NfycP70353 335 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Brsk1Q5RJI5 778 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Lcp2Q60787 533 aaKnown RBP9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rbl1Q64701 1063 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Prrt3Q6PE13 971 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Bend6Q6PFX2 281 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nup107Q8BH74 926 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gk5Q8BX05 534 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Asb14Q8C6Y6 587 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pgm2l1Q8CAA7 621 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Chst15Q91XQ5 561 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Traf7Q922B6 594 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Unc50Q9CQ61 259 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 AasdhpptQ9CQF6 309 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Trip4Q9QXN3 581 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gpc6Q9R087 555 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cdh17Q9R100 827 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn1r49Q9WUF1 310 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Btbd19S4R1I0 287 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Scn9aQ62205 1984 aa9.39□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ncam1P13595 1115 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MutP16332 748 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 BdnfP21237 249 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Serpina3cP29621 417 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pou2f2Q00196 463 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pnrc1Q3TWH3 297 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sec31bQ3TZ89 1158 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Uimc1Q5U5Q9 727 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Kcnh1Q60603 989 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gpr19Q61121 415 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Eif2b4Q61749 524 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dlgap3Q6PFD5 977 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Slc36a3Q811P0 477 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Tspan9Q8BJU2 239 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fbxo48Q8CAT8 161 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Acad9Q8JZN5 625 aaKnown RBP9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Traf3ip2Q8N7N6 555 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Olfr665Q8VG79 316 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Pcdhgc3Q91XX1 934 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 OptcQ920A0 328 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 S100a14Q9D2Q8 104 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Spesp1Q9D5A0 399 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ccdc81Q9D5W4 654 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Efhd2Q9D8Y0 240 aaKnown RBP9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 AcadsbQ9DBL1 432 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dhx34Q9DBV3 1145 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Nif3l1Q9EQ80 376 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ndst3Q9EQH7 873 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Wdr12Q9JJA4 423 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rad18Q9QXK2 509 aaKnown RBP9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Syt5Q9R0N5 386 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Adh6bA0A1D5RMB0 384 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Vmn2r96E9PZU5 664 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm17093F6XGJ4 214 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm6337K7N6X9 211 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Gm3115L7N285 211 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 GzmkO35205 263 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Edil3O35474 480 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Csf3rP40223 837 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sox2P48432 319 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Jak1P52332 1153 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 DbtP53395 482 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Cct7P80313 544 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Znf865Q3U3I9 1058 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Sh2d1b2Q45HK4 132 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 B3gnt7Q8K0J2 397 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 BroxQ8K2Q7 411 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MfrpQ8K480 584 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Mcoln3Q8R4F0 553 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Fam20bQ8VCS3 409 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Dennd2dQ91VV4 469 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Rad51cQ924H5 366 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 MpstQ99J99 297 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Leng1Q9DB98 261 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Ap1m2Q9WVP1 423 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Bag6Q9Z1R2 1154 aaKnown RBP9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 IsxA1A546 240 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Lzts3A2AHG0 700 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Itih4A6X935 942 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 Trim30bE9PVL6 203 aa9.38□□□□□ -0.91
Col6a1-201ENSMUST00000001147 ClppO88696 272 aa9.38□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms