RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 LIG3P49916 1009 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 CLDN6P56747 220 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PRAMEP78395 509 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PTSQ03393 145 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 ACVR1Q04771 509 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 FRG1Q14331 258 aaKnown RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 EFTUD2Q15029 972 aaKnown RBP eCLIP9.33□□□□□ -0.921e-6■□□□□ 8.1
PHGDH-228ENST00000641847 ACOX1Q15067 660 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 SKIDA1Q1XH10 827 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 TRMT10BQ6PF06 316 aaKnown RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 AFTPHQ6ULP2 937 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 LIPIQ6XZB0 460 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 HSD11B1LQ7Z5J1 315 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 KCNMB4Q86W47 210 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 GATAD2AQ86YP4 633 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 UNC5BQ8IZJ1 945 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 DCBLD1Q8N8Z6 715 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 FBF1Q8TES7 1133 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 TTC9Q92623 222 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 BIRC7Q96CA5 298 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 CCDC97Q96F63 343 aaPredicted RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 C6orf106Q9H6K1 298 aaPredicted RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 PPANQ9NQ55 473 aaKnown RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 C20orf96Q9NUD7 363 aaPredicted RBP9.33□□□□□ -0.92
PHGDH-228ENST00000641847 IL17CQ9P0M4 197 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 FAM169AQ9Y6X4 670 aa9.33□□□□□ -0.92
PHGDH-228ENST00000641847 LRRK1Q38SD2 2015 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 GLYATL1P3A0A0U1RQE8 302 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 A0A1W2PQU0 124 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 CCDC162PA2VCL2 907 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 OR51F1A6NGY5 319 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 GOLGA8KD6RF30 607 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 GOLGA8TH3BQL2 631 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 LZTS3O60299 673 aaPredicted RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 MMP20O60882 483 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 RNGTTO60942 597 aaKnown RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 VAPBO95292 243 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 GOT2P00505 430 aaKnown RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ERVK-10P10266 1014 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 CKMT2P17540 419 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 GM2AP17900 193 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 PSMA3P25788 255 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 MC4RP32245 332 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ACSL1P33121 698 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ARCN1P48444 511 aaKnown RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SPINT3P49223 89 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ERVPABLB-1P60509 514 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 NFATC3Q12968 1075 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 PEX6Q13608 980 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SLC29A2Q14542 456 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 CASP8Q14790 479 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 KLHL38Q2WGJ6 581 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ZDHHC20Q5W0Z9 365 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 PDPK2PQ6A1A2 396 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 KIAA1161Q6NSJ0 714 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 ZNF449Q6P9G9 518 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 XKR5Q6UX68 686 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 FAM151BQ6UXP7 276 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 RFLNAQ6ZTI6 216 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 OXR1Q8N573 874 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 OR6P1Q8NGX9 317 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SAP25Q8TEE9 199 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SNRNP27Q8WVK2 155 aaKnown RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 HDAC10Q969S8 669 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 NUS1Q96E22 293 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 DTD2Q96FN9 168 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 CDKN2AIPNLQ96HQ2 116 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 TBATAQ96M53 351 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 COQ10AQ96MF6 247 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 FAM167BQ9BTA0 163 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 FUT8Q9BYC5 575 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SUDS3Q9H7L9 328 aaPredicted RBP9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SGK2Q9HBY8 427 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 PREBQ9HCU5 417 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SMYD2Q9NRG4 433 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 MOCS1Q9NZB8 636 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 SLC17A6Q9P2U8 582 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 CD84Q9UIB8 345 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 COQ6Q9Y2Z9 468 aa9.32□□□□□ -0.92
PHGDH-228ENST00000641847 EXOC1LA0A1B0GW35 172 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RGSL1A5PLK6 1076 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 IGLON5A6NGN9 336 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 FAM47DPA6NHR8 397 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 LRRC72A6NJI9 287 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 FAM159BA6NKW6 160 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 H7C0S8 307 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 WNT9AO14904 365 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 TM7SF2O76062 418 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 SRP72O76094 671 aaKnown RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 RECQL5O94762 991 aaPredicted RBP9.31□□□□□ -0.92
PHGDH-228ENST00000641847 PRAMEF1O95521 474 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 C1QAP02745 245 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 SHBGP04278 402 aa9.31□□□□□ -0.92
PHGDH-228ENST00000641847 NUDT17P0C025 328 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms