RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 LRRC37AA6NMS7 1700 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LTBP1Q14766 1721 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 MGAMO43451 1857 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 RGPD3A6NKT7 1758 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 RGPD4Q7Z3J3 1758 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 SLC12A8A0AV02 714 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 ILVBLA1L0T0 632 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 GJB3O75712 270 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 EPHA2P29317 976 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 MATKP42679 507 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 ARCN1P48444 511 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 CLK1P49759 484 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 GHRHRQ02643 423 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 RAPSNQ13702 412 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 OTUD1Q5VV17 481 aaPredicted RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LCN8Q6JVE9 175 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 RGMBQ6NW40 437 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 PKN3Q6P5Z2 889 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 USP51Q70EK9 711 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 ARMCX2Q7L311 632 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 PACRGLQ8N7B6 248 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 TERB1Q8NA31 727 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 LILRB4Q8NHJ6 448 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 SLC10A4Q96EP9 437 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 THUMPD3Q9BV44 507 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 MAGEE1Q9HCI5 957 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 EIF2B3Q9NR50 452 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 TRMT13Q9NUP7 481 aaKnown RBP13.64□□□□□ -0.23
SCARB2-227ENST00000640957 GIMAP4Q9NUV9 329 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 GJD2Q9UKL4 321 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 IFT52Q9Y366 437 aa13.64□□□□□ -0.23
SCARB2-227ENST00000640957 CCDC154A6NI56 674 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ZNF99A8MXY4 864 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 MYO1GB0I1T2 1018 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ARVCFO00192 962 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 MOCS2O96007 188 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ALPLP05186 524 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 CHRNB1P11230 501 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PFKLP17858 780 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ICAM3P32942 547 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PSMD8P48556 350 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 AGAP9Q5VTM2 703 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 NLGN4XQ8N0W4 816 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ZNF555Q8NEP9 628 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ZUFSPQ96AP4 578 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 EMILIN2Q9BXX0 1053 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 NDFIP2Q9NV92 336 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 INTS10Q9NVR2 710 aaKnown RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 MARCH4Q9P2E8 410 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 TNFSF13BQ9Y275 285 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 TCRBV5S2A0A599 114 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 YJEFN3A6XGL0 299 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 SLC1A7O00341 560 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PRSS23O95084 383 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 LTA4HP09960 611 aaKnown RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 CXCR2P25025 360 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 AZGP1P25311 298 aaKnown RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 RAB15P59190 212 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ENPEPQ07075 957 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 GTF2H3Q13889 308 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 CCBE1Q6UXH8 406 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PRR23CQ6ZRP0 262 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 TBC1D21Q8IYX1 336 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PHACTR4Q8IZ21 702 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 FAR1Q8WVX9 515 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ROGDIQ9GZN7 287 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 NXF3Q9H4D5 531 aaKnown RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 RBPJLQ9UBG7 517 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 SNX6Q9UNH7 406 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 PCDHA9Q9Y5H5 950 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ASB14A6NK59 587 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ZBTB42B2RXF5 422 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 GSTA4O15217 222 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 GSTM2P28161 218 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 SKIV2LQ15477 1246 aaKnown RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 NPTX1Q15818 432 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 DGUOKQ16854 277 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 NXNL2Q5VZ03 156 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 LAIR1Q6GTX8 287 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 AURKBQ96GD4 344 aaPredicted RBP13.63□□□□□ -0.23
SCARB2-227ENST00000640957 ASPSCR1Q9BZE9 553 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 DSN1Q9H410 356 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 FZD8Q9H461 694 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 B3GNT3Q9Y2A9 372 aa13.63□□□□□ -0.23
SCARB2-227ENST00000640957 TRIM64A6NGJ6 449 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 ZSCAN5BA6NJL1 495 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 FZD9O00144 591 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 MLYCDO95822 493 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 CYBBP04839 570 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 IL12AP29459 219 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 ALDH3A2P51648 485 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 ARSDP51689 593 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 CHRNB3Q05901 458 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 PKDCCQ504Y2 493 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 KCTD11Q693B1 232 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 SULT1C3Q6IMI6 304 aa13.62□□□□□ -0.23
SCARB2-227ENST00000640957 P2RY8Q86VZ1 359 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms