RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 NFATC1O95644 943 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 TRBC1P01850 177 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 GSNP06396 782 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 CSKP41240 450 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 ANXA8L1Q5VT79 327 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 C17orf64Q86WR6 236 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 SMG8Q8ND04 991 aaKnown RBP17.42■□□□□ 0.38
SCARB2-223ENST00000640640 CYP2S1Q96SQ9 504 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 TCF25Q9BQ70 676 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 SLC7A8Q9UHI5 535 aa17.42■□□□□ 0.38
SCARB2-223ENST00000640640 DNAJC25-GNG10A0A024R161 153 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 TYROBPO43914 113 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 NIPSNAP2O75323 286 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 SLC11A1P49279 550 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 SKP1P63208 163 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 LIPEQ05469 1076 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 CPTPQ5TA50 214 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 PPCDCQ96CD2 204 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 KLHL32Q96NJ5 620 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 ASB3Q9Y575 518 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 A0A1W2PRU2 124 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 IMPDH1P20839 514 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 HTR1BP28222 390 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 NOS3P29474 1203 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 UPP1Q16831 310 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 MS4A13Q5J8X5 152 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 BROXQ5VW32 411 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 ING5Q8WYH8 240 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 WASF2Q9Y6W5 498 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 E7ESA3 106 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 FAM72CH0Y354 149 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 DLX3O60479 287 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 GPR32O75388 356 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 CNTN5O94779 1100 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 SIX3O95343 332 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 TLX1P31314 330 aaPredicted RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 SEMG2Q02383 582 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 FAM72AQ5TYM5 149 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 SULT1C3Q6IMI6 304 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 FAM72DQ6L9T8 149 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 FAM72BQ86X60 149 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 GABRQQ9UN88 632 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 GNEQ9Y223 722 aaKnown RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 U3KQV3 271 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 ZNF623O75123 536 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 TOP3BO95985 862 aaKnown RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 GNRH1P01148 92 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 ITGA2P17301 1181 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 IFNGR2P38484 337 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 TXNDC8Q6A555 127 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 BHLHB9Q6PI77 547 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 CCDC103Q8IW40 242 aa17.41■□□□□ 0.38
SCARB2-223ENST00000640640 PHF10Q8WUB8 498 aaKnown RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 IMP3Q9NV31 184 aaKnown RBP17.41■□□□□ 0.38
SCARB2-223ENST00000640640 MTMR11A4FU01 709 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 PAICSP22234 425 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 IVDP26440 423 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ZNF252P-AS1Q0IIN9 211 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 TOP3AQ13472 1001 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 TIFABQ6ZNK6 161 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 PLEKHM3Q6ZWE6 761 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ZNF280BQ86YH2 543 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 AUTS2Q8WXX7 1259 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 NUSAP1Q9BXS6 441 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 EPB41L4BQ9H329 900 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ALG2Q9H553 416 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 MYH14Q7Z406 1995 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ITGB4P16144 1822 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 A8MT66 165 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 SERPINI2O75830 405 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 EIF2S1P05198 315 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 EPHX1P07099 455 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 IQCF3P0C7M6 154 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 NR2F1P10589 423 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 SLC6A2P23975 617 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 CHIT1Q13231 466 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 DPYSQ14117 519 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 RFX4Q33E94 735 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 PHYKPLQ8IUZ5 450 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 WRAP53Q9BUR4 548 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 CLK4Q9HAZ1 481 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 FADS3Q9Y5Q0 445 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 AOC2O75106 756 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 PRKCGP05129 697 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ACRP10323 421 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 IGFBP4P22692 258 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 HERVK_113P63132 956 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 RBM20Q5T481 1227 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 TMEM40Q8WWA1 233 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ROPN1LQ96C74 230 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 OR52B2Q96RD2 323 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 SYT11Q9BT88 431 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ERVK-6Q9BXR3 956 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 MRPS26Q9BYN8 205 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 KLHL3Q9UH77 587 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 ZMYND8Q9ULU4 1186 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 TMED10P49755 219 aaKnown RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 USP46P62068 366 aa17.4■□□□□ 0.38
SCARB2-223ENST00000640640 BEND7Q8N7W2 519 aaPredicted RBP17.4■□□□□ 0.38
SCARB2-223ENST00000640640 EME2A4GXA9 379 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms