RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, human

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSPAN9-208	ENST00000640568	TYSND1	Q2T9J0	566 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	KHDC1	Q4VXA5	237 aa	Known RBP	21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	ZNF449	Q6P9G9	518 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	GALNT13	Q8IUC8	556 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	TRAPPC5	Q8IUR0	188 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	MYRIP	Q8NFW9	859 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	FBF1	Q8TES7	1133 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	OR1E3	Q8WZA6	343 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	PDXP	Q96GD0	296 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	BOC	Q9BWV1	1114 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	CLPB	Q9H078	707 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	ERVMER34-1	Q9H9K5	563 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	FSCN3	Q9NQT6	498 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	INTS10	Q9NVR2	710 aa	Known RBP	21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	NSMCE4A	Q9NXX6	385 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	TXNDC16	Q9P2K2	825 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	FBXO5	Q9UKT4	447 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	SUFU	Q9UMX1	484 aa		21.32	■■□□□ 1
TSPAN9-208	ENST00000640568	PROB1	E7EW31	1015 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568		F8W8V4	182 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ARHGAP33	O14559	1287 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	IVL	P07476	585 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	GNPDA1	P46926	289 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	SPEM2	Q0P670	501 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	EIF2B5	Q13144	721 aa	Known RBP	21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ALG11	Q2TAA5	492 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ZNF542P	Q5EBM4	170 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	TEDDM1	Q5T9Z0	273 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	PACS1	Q6VY07	963 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	KIAA0408	Q6ZU52	694 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	CYS1	Q717R9	158 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	CNTN4	Q8IWV2	1026 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	CTAGE3P	Q8IX95	158 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	PNPLA1	Q8N8W4	532 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	UBLCP1	Q8WVY7	318 aa	Predicted RBP	21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ZNF514	Q96K75	400 aa	Predicted RBP	21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	GTPBP2	Q9BX10	602 aa	Known RBP	21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	SLC13A1	Q9BZW2	595 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	FBXO6	Q9NRD1	293 aa	Predicted RBP	21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ZNHIT2	Q9UHR6	403 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	GPSM3	Q9Y4H4	160 aa		21.31	■■□□□ 1
TSPAN9-208	ENST00000640568	ZFC3H1	O60293	1989 aa	Known RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	IGLV3-16	A0A075B6K0	115 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	OR2AG2	A6NM03	316 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	QSOX1	O00391	747 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	GRID2	O43424	1007 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	LRP3	O75074	770 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	CER1	O95813	267 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	ZNF806	P0C7X5	589 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	CTSE	P14091	401 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	JUND	P17535	347 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	ARRB1	P49407	418 aa	Predicted RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	HK3	P52790	923 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	IRX4	P78413	519 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	MPP1	Q00013	466 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	TCEAL6	Q6IPX3	200 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	TMEM220	Q6QAJ8	160 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	CRTC3	Q6UUV7	619 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	LRRTM4	Q86VH4	590 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	PHACTR4	Q8IZ21	702 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	RASGEF1A	Q8N9B8	481 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	C2CD4A	Q8NCU7	369 aa	Predicted RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	AEN	Q8WTP8	325 aa	Known RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	TCEAL3	Q969E4	200 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	ELF4	Q99607	663 aa	Predicted RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	CCDC68	Q9H2F9	335 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	APOBEC3B	Q9UH17	382 aa	Known RBP	21.3	■■□□□ 1
TSPAN9-208	ENST00000640568	DGKB	Q9Y6T7	804 aa		21.3	■■□□□ 1
TSPAN9-208	ENST00000640568		A0A087WUV0	522 aa	Predicted RBP	21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	PRMT5	O14744	637 aa	Predicted RBP	21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	RIPK2	O43353	540 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	OR1I1	O60431	355 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	DNAJC6	O75061	913 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	ERLIN1	O75477	346 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	AP2A2	O94973	939 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	CSF2	P04141	144 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	OR56A5	P0C7T3	313 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	ENG	P17813	658 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	EIF3B	P55884	814 aa	Known RBP	21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	HNRNPK	P61978	463 aa	Known RBP eCLIP	21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	B4GALNT1	Q00973	533 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	BNC1	Q01954	994 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	PRAMEF14	Q5SWL7	426 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	SLC26A11	Q86WA9	606 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	LRRC6	Q86X45	466 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	SGF29	Q96ES7	293 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	OR2M4	Q96R27	311 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	TXLNGY	Q9BZA5	131 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	SLC17A6	Q9P2U8	582 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	RAPGEFL1	Q9UHV5	662 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	GNPTG	Q9UJJ9	305 aa		21.29	■■□□□ 1
TSPAN9-208	ENST00000640568	FAM159B	A6NKW6	160 aa		21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	SCAMP1	O15126	338 aa		21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	DFNA5	O60443	496 aa		21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	NME1	P15531	152 aa	Known RBP	21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	HLA-B	Q31612	363 aa		21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	KBTBD12	Q3ZCT8	623 aa		21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	PTRHD1	Q6GMV3	140 aa	Known RBP	21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	UHMK1	Q8TAS1	419 aa	Known RBP	21.28	■■□□□ 1
TSPAN9-208	ENST00000640568	CCDC97	Q96F63	343 aa	Predicted RBP	21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms