RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 OR2B3O76000 313 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DCKP27707 260 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SERPINB8P50452 374 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CDK16Q00536 496 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 GALNT3Q14435 633 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MAPKAPK3Q16644 382 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PTPRNQ16849 979 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ATP6AP1LQ52LC2 224 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 LCTLQ6UWM7 567 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ATG14Q6ZNE5 492 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NEK10Q6ZWH5 1172 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 STRA8Q7Z7C7 330 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TMPRSS11BQ86T26 416 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CCDC36Q8IYA8 594 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 OR5L2Q8NGL0 311 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 METTL6Q8TCB7 284 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 AZIN2Q96A70 460 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 HERPUD2Q9BSE4 406 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TM7SF3Q9NS93 570 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PCDH10Q9P2E7 1040 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PPARGC1AQ9UBK2 798 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NEU2Q9Y3R4 380 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NUP98P52948 1817 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 DUOX1Q9NRD9 1551 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ILVBLA1L0T0 632 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 RGS14O43566 566 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PDE9AO76083 593 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ERCC2P18074 760 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ATF4P18848 351 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 COMTP21964 271 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PON1P27169 355 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CRABP2P29373 138 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MC4RP32245 332 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 CCNHP51946 323 aaPredicted RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 NDST2P52849 883 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MAXP61244 160 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 FUT2Q10981 343 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 UGCGQ16739 394 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SLC25A24Q6NUK1 477 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 MACC1Q6ZN28 852 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ALYREFQ86V81 257 aaKnown RBP4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF527Q8NB42 609 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 SPPL3Q8TCT6 385 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 INPP5DQ92835 1189 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PNPLA2Q96AD5 504 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 FAM86C1Q9NVL1 165 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 TAS2R14Q9NYV8 317 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 ASTN1O14525 1302 aa4.98□□□□□ -1.61
SCN1A-218ENST00000640036 PNMA8CA0A1B0GUJ8 204 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 OR1F1O43749 312 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 SH3BGRLO75368 114 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 RGS20O76081 388 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 TMEM253P0C7T8 217 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 FBLP22087 321 aaKnown RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 IRS1P35568 1242 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 GDI2P50395 445 aaKnown RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 CLCN5P51795 746 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 PPP2R2AP63151 447 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF155Q12901 538 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 IL18R1Q13478 541 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 MEA1Q16626 185 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 DUSP6Q16828 381 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 PDPK2PQ6A1A2 396 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 PYHIN1Q6K0P9 492 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 SHC4Q6S5L8 630 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 RASSF6Q6ZTQ3 369 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 TOR1AIP2Q8NFQ8 470 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ANKRD7Q92527 254 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 LRCH3Q96II8 777 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 IP6K3Q96PC2 410 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 RC3H2Q9HBD1 1191 aaKnown RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 PCDH18Q9HCL0 1135 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF304Q9HCX3 659 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ABHD10Q9NUJ1 306 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 WNT16Q9UBV4 365 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 PAPPA2Q9BXP8 1791 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 OR2AG2A6NM03 316 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 TULP3O75386 442 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 GIMD1P0DJR0 217 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 VIPR1P32241 457 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ADRM1Q16186 407 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 FAM187BQ17R55 369 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF805Q5CZA5 627 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ARMC3Q5W041 872 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF470Q6ECI4 717 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 FAM183BPQ6ZVS7 135 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF605Q86T29 641 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZNF280BQ86YH2 543 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 C2orf73Q8N5S3 287 aaPredicted RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 SLC5A8Q8N695 610 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ZMIZ2Q8NF64 920 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 MDM1Q8TC05 714 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 GRAMD1AQ96CP6 724 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 KLHL29Q96CT2 875 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 TEKT5Q96M29 485 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 DDX18Q9NVP1 670 aaKnown RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 SCN3BQ9NY72 215 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 ADAMTS5Q9UNA0 930 aa4.97□□□□□ -1.61
SCN1A-218ENST00000640036 FCF1Q9Y324 198 aaKnown RBP4.97□□□□□ -1.61
SCN1A-218ENST00000640036 METTL21EPA6NDL7 271 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 163.8 ms