RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 TOP3BO95985 862 aaKnown RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 PRKCGP05129 697 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 ABHD2P08910 425 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 TAC1P20366 129 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SDHAP31040 664 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 ATP5C1P36542 298 aaKnown RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 MAGEA3P43357 314 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 MAGEA6P43360 314 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 PGGT1BP53609 377 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CRADDP78560 199 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SLC7A9P82251 487 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CAV1Q03135 178 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 NME3Q13232 169 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 PDK2Q15119 407 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 MLF2Q15773 248 aaPredicted RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 SLC25A52Q3SY17 297 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 TMEM31Q5JXX7 168 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 C10orf120Q5SQS8 335 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 BSPRYQ5W0U4 402 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 FAM219BQ5XKK7 198 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CES3Q6UWW8 571 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CDHR3Q6ZTQ4 885 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 TPRG1Q6ZUI0 275 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 STRADAQ7RTN6 431 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SRLQ86TD4 932 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 TAC4Q86UU9 113 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 C4orf33Q8N1A6 199 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SIX6OS1Q8N1H7 587 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 PNPLA1Q8N8W4 532 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CKAP2Q8WWK9 683 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 E2F7Q96AV8 911 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 CENPTQ96BT3 561 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 FOXRED1Q96CU9 486 aaPredicted RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 THOC1Q96FV9 657 aaKnown RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 CFAP36Q96G28 342 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 OXNAD1Q96HP4 312 aaPredicted RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 QKIQ96PU8 341 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATM-229ENST00000639953 DEPDC7Q96QD5 511 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 MLPHQ9BV36 600 aaPredicted RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 NACA2Q9H009 215 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 VPS37BQ9H9H4 285 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 ARHGEF3Q9NR81 526 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 THG1LQ9NWX6 298 aaKnown RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 DUS2Q9NX74 493 aaKnown RBP6.09□□□□□ -1.43
ATM-229ENST00000639953 OBP2AQ9NY56 170 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 IL1RAPL1Q9NZN1 696 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SLC17A7Q9P2U7 560 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 WNT16Q9UBV4 365 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SFMBT1Q9UHJ3 866 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 ARHGAP26Q9UNA1 814 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SHOC2Q9UQ13 582 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 SH3BP1Q9Y3L3 701 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 FAM169AQ9Y6X4 670 aa6.09□□□□□ -1.43
ATM-229ENST00000639953 TCRBV16S1A1N1A0A5B0 115 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ANTXRLA6NF34 631 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 CAPN14A8MX76 684 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TCP11X1B4DZS4 312 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 GOLGA8RI6L899 631 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 MSI1O43347 362 aaKnown RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 CREB3O43889 395 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TYROBPO43914 113 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 GCATO75600 419 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 IGLV3-25P01717 112 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 KLKB1P03952 638 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 DCNP07585 359 aaKnown RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 BRAFP15056 766 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 GLULP15104 373 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ERCC2P18074 760 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TGM2P21980 687 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 APEX1P27695 318 aaKnown RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 RPA3P35244 121 aaPredicted RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 ACADSBP45954 432 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 CXCR3P49682 368 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 NUMBP49757 651 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TUBP50607 506 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 KPNA1P52294 538 aaPredicted RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 BASP1P80723 227 aaKnown RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 DEUP1Q05D60 604 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 DPTQ07507 201 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ZBTB17Q13105 803 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 RIN1Q13671 783 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TUBA3CQ13748 450 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 RUNX3Q13761 415 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 STAT4Q14765 748 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 UBXN2BQ14CS0 331 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 PAFAH1B3Q15102 231 aaKnown RBP6.08□□□□□ -1.44
ATM-229ENST00000639953 ITPRIPL2Q3MIP1 535 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 GLIPR1L2Q4G1C9 344 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 SLC45A4Q5BKX6 768 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TRIM61Q5EBN2 209 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 EFHC1Q5JVL4 640 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ANKRD20A2Q5SQ80 823 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ANKRD20A1Q5TYW2 823 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ANKRD20A3Q5VUR7 823 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 C3orf62Q6ZUJ4 267 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ARCQ7LC44 396 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 HOOK3Q86VS8 718 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 ARHGAP12Q8IWW6 846 aa6.08□□□□□ -1.44
ATM-229ENST00000639953 BBS7Q8IWZ6 715 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms