RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, human

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRIP-208	ENST00000639561	TPGS1	Q6ZTW0	290 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	CAMK1D	Q8IU85	385 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	CMTM8	Q8IZV2	173 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	ACTRT2	Q8TDY3	377 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	TCF12	Q99081	682 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	TAS2R13	Q9NYV9	303 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	LSM7	Q9UK45	103 aa	Known RBP	13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	ANKRD12	Q6UB98	2062 aa		13.74	□□□□□ -0.21
ATRIP-208	ENST00000639561	CCDC189	A1A4V9	331 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	LRRC14B	A6NHZ5	514 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561		F8W8V4	182 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CLGN	O14967	610 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	STX7	O15400	261 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SUPT7L	O94864	414 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SIX3	O95343	332 aa	Predicted RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PENK	P01210	267 aa	Predicted RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SP9	P0CG40	484 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CTPS1	P17812	591 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	GK	P32189	559 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	ACTR3	P61158	418 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	HERVK_113	P63132	956 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	LMAN2	Q12907	356 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PTPRN	Q16849	979 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CTSL3P	Q5NE16	218 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CYHR1	Q6ZMK1	362 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SNX32	Q86XE0	403 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	DEFB107A	Q8IZN7	70 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	RHEBL1	Q8TAI7	183 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	DTX3L	Q8TDB6	740 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	GPR21	Q99679	349 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	C2orf49	Q9BVC5	232 aa	Predicted RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	ERVK-6	Q9BXR3	956 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SLC46A2	Q9BY10	475 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	EML4	Q9HC35	981 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	IL17C	Q9P0M4	197 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	NDRG2	Q9UN36	371 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SH3BP1	Q9Y3L3	701 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	ZNF711	Q9Y462	761 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	COPG1	Q9Y678	874 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	TRPC5OS	A6NMA1	111 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561		H7C0S8	307 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PDE5A	O76074	875 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PGLS	O95336	258 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CD70	P32970	193 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CDH13	P55290	713 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SESN3	P58005	492 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	XIAP	P98170	497 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	C1orf146	Q5VVC0	180 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PGM2L1	Q6PCE3	622 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	LYSMD3	Q7Z3D4	306 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	SUPV3L1	Q8IYB8	786 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PELI3	Q8N2H9	469 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	CPXM2	Q8N436	756 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	GIMAP7	Q8NHV1	300 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PIH1D2	Q8WWB5	315 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	STMN2	Q93045	179 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	MYO19	Q96H55	970 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	RTKN	Q9BST9	563 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	TRMO	Q9BU70	441 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	TFB2M	Q9H5Q4	396 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	MEAF6	Q9HAF1	191 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	EVL	Q9UI08	416 aa	Predicted RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	INTS6	Q9UL03	887 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	ARHGAP26	Q9UNA1	814 aa		13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	OAS3	Q9Y6K5	1087 aa	Known RBP	13.73	□□□□□ -0.21
ATRIP-208	ENST00000639561	PPP6C	O00743	305 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	SMIM24	O75264	130 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	NIPSNAP2	O75323	286 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	ZNF821	O75541	412 aa	Predicted RBP	13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CIB2	O75838	187 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	EPHB1	P54762	984 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	AP1S1	P61966	158 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	LRRC32	Q14392	662 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	PPP1R3A	Q16821	1122 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	PFKFB4	Q16877	469 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	ZRANB3	Q5FWF4	1079 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CLEC6A	Q6EIG7	209 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	RETSAT	Q6NUM9	610 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	TLDC1	Q6P9B6	456 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	RALGPS2	Q86X27	583 aa	Predicted RBP	13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	RIN3	Q8TB24	985 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	KIAA1191	Q96A73	305 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	ZNF570	Q96NI8	536 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	DERL2	Q9GZP9	239 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CCDC68	Q9H2F9	335 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CHRD	Q9H2X0	955 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	ZBTB26	Q9HCK0	441 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	HACD3	Q9P035	362 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	MCM8	Q9UJA3	840 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CCL26	Q9Y258	94 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	WASF2	Q9Y6W5	498 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	HELZ	P42694	1942 aa	Known RBP	13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	TRAV19	A0A0A6YYK7	116 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	RGSL1	A5PLK6	1076 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	SHISA7	A6NL88	538 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	LEFTY2	O00292	366 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	CCNT2	O60583	730 aa	Known RBP	13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	TSPAN12	O95859	305 aa		13.72	□□□□□ -0.21
ATRIP-208	ENST00000639561	RPSA	P08865	295 aa	Known RBP	13.72	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms