RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 UQCRBP14927 111 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RHCEP18577 417 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ADH6P28332 368 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SLC11A2P49281 568 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CES4AQ5XG92 561 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ABLIM2Q6H8Q1 611 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 KRT80Q6KB66 452 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RPL13AP3Q6NVV1 102 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TTC27Q6P3X3 843 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DCUN1D2Q6PH85 259 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PGAP1Q75T13 922 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LRRC8DQ7L1W4 858 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LRRC70Q7Z2Q7 622 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ANKS1BQ7Z6G8 1248 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CYP4Z1Q86W10 505 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CMASQ8NFW8 434 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 OR52M1Q8NGK5 317 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TMCO6Q96DC7 493 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 OR1F2PQ96R84 312 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MIPEPQ99797 713 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TRAF4Q9BUZ4 470 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NPLQ9BXD5 320 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ADGRE3Q9BY15 652 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DGCR6LQ9BY27 220 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF334Q9HCZ1 680 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LRFN1Q9P244 771 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MYRFQ9Y2G1 1151 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NUP214P35658 2090 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 POLR2AP24928 1970 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 A0A1W2PPQ1 181 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 G3V2T6 193 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SEC24AO95486 1093 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 THPOP40225 353 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 BUD31P41223 144 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LEPRP48357 1165 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GPR143P51810 404 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 KCNQ4P56696 695 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TARBP2Q15633 366 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 OR6Y1Q8NGX8 325 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 LKAAEAR1Q8TD35 194 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ELP5Q8TE02 316 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SNX19Q92543 992 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MAGEB10Q96LZ2 347 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TRABDQ9H4I3 376 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PAK6Q9NQU5 681 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 EIF3KQ9UBQ5 218 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PLAGL2Q9UPG8 496 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 SLC22A7Q9Y694 548 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PBRM1Q86U86 1689 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 AOX1Q06278 1338 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TDRD15B5MCY1 1934 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 A0A0B4J293 547 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 USP17L3A6NCW0 530 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 WASHC1A8K0Z3 465 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 WASH3PC4AMC7 463 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CLDN25C9JDP6 229 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GPR37O15354 613 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MED6O75586 246 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 BCL10O95999 233 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 TGM1P22735 817 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PIK3R1P27986 724 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 GNA15P30679 374 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 YWHAGP61981 247 aaKnown RBP eCLIP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 C1QBPQ07021 282 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CNN3Q15417 329 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MEI1Q5TIA1 1274 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF385CQ66K41 422 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 USP17L2Q6R6M4 530 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 WASH2PQ6VEQ5 465 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 USP17L1Q7RTZ2 530 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ENTHD1Q8IYW4 607 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 CDK20Q8IZL9 346 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 RNF31Q96EP0 1072 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 ZNF641Q96N77 438 aaPredicted RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 KCNMB3Q9NPA1 279 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MAN2C1Q9NTJ4 1040 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 NARFQ9UHQ1 456 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 MRPS2Q9Y399 296 aaKnown RBP4.28□□□□□ -1.72
SCN3A-209ENST00000639244 DYRK1BQ9Y463 629 aa4.28□□□□□ -1.72
SCN3A-209ENST00000639244 PI4KAP2A4QPH2 592 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 SULT1C4O75897 302 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 ANXA1P04083 346 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 TPOP07202 933 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 FAM58BPP0C7Q3 252 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 FGFR1P11362 822 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 CD46P15529 392 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 CSNK1DP48730 415 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 LRRC63Q05C16 580 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 NCOA4Q13772 614 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 PDK3Q15120 406 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 KYNUQ16719 465 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 QPCTQ16769 361 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 FNDC3BQ53EP0 1204 aaKnown RBP4.28□□□□□ -1.73
SCN3A-209ENST00000639244 HEPHL1Q6MZM0 1159 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 CFAP77Q6ZQR2 320 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 DDIASQ8IXT1 998 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 RNF113BQ8IZP6 322 aaKnown RBP4.28□□□□□ -1.73
SCN3A-209ENST00000639244 GALNT4Q8N4A0 578 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 OR2C3Q8N628 320 aa4.28□□□□□ -1.73
SCN3A-209ENST00000639244 AOPEPQ8N6M6 819 aa4.28□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms