RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 SGF29Q96ES7 293 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 C19orf43Q9BQ61 176 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 DNAJC16Q9Y2G8 782 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 A6NCN8 305 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 PRR19A6NJB7 356 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 OR2AG2A6NM03 316 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 SNX2O60749 519 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 AVILO75366 819 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TMEM63AO94886 807 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 ZNF7P17097 686 aaPredicted RBP21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TPSB2P20231 275 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 E2F1Q01094 437 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TARDBPQ13148 414 aaKnown RBP eCLIP21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TPSAB1Q15661 275 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TSTD2Q5T7W7 516 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TMEM220Q6QAJ8 160 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 SNX20Q7Z614 316 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TMPRSS12Q86WS5 348 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 TRAPPC5Q8IUR0 188 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 GATA6Q92908 595 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 RANBP9Q96S59 729 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 PRDM8Q9NQV8 689 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 CHRAC1Q9NRG0 131 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 SCHIP1Q9P0W5 487 aaPredicted RBP21.47■■□□□ 1.03
SCN1B-206ENST00000638536 LRIT1Q9P2V4 623 aa21.47■■□□□ 1.03
SCN1B-206ENST00000638536 GOLGA6L10A0A0M3HER8 536 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 CCDC162PA2VCL2 907 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 C1QTNF9BB2RNN3 333 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 GPR89AB7ZAQ6 455 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 KMOO15229 486 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 PPM1DO15297 605 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 SGTAO43765 313 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 C1QTNF9P0C862 333 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 GPR89BP0CG08 455 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 CDK4P11802 303 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 JUPP14923 745 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 ADRA1DP25100 572 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 PTGIRP43119 386 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 CAMK2BQ13554 666 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 ZRANB3Q5FWF4 1079 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 CDCP2Q5VXM1 449 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 NXPE1Q8N323 547 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 GALNT15Q8N3T1 639 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 Q8N9G6 341 aaPredicted RBP21.46■■□□□ 1.03
SCN1B-206ENST00000638536 NAT6Q93015 286 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 TTC25Q96NG3 672 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 EVA1BQ9NVM1 165 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.46■■□□□ 1.03
SCN1B-206ENST00000638536 CRLS1Q9UJA2 301 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 TCAF1Q9Y4C2 921 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 APC2O95996 2303 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 EPG5Q9HCE0 2579 aa21.46■■□□□ 1.03
SCN1B-206ENST00000638536 ZZEF1O43149 2961 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 TRBV5-4A0A0C4DH59 114 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 A0A1W2PQM1 296 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 HEATR9A2RTY3 570 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 MT-CO3P00414 261 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 GLB1P16278 677 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 AKT1P31749 480 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 MAGEA6P43360 314 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 CCL7P80098 99 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 INSCQ1MX18 579 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 SYT10Q6XYQ8 523 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 SLC37A2Q8TED4 501 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 HDAC10Q969S8 669 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 CNTNAP3BQ96NU0 1288 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 CNTNAP3Q9BZ76 1288 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 ABCG4Q9H172 646 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 OSGEPL1Q9H4B0 414 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 SLC30A1Q9Y6M5 507 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 ACACAQ13085 2346 aa21.45■■□□□ 1.02
SCN1B-206ENST00000638536 GAS8O95995 478 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 ITGALP20701 1170 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 MGAT1P26572 445 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 ETF1P62495 437 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 SKIDA1Q1XH10 827 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 FNBP1LQ5T0N5 605 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 LRRC8BQ6P9F7 803 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 CAND1Q86VP6 1230 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 SERPINA9Q86WD7 417 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 KLHL7Q8IXQ5 586 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 MPP5Q8N3R9 675 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 SFRP1Q8N474 314 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 SYBUQ9NX95 663 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 CLCA2Q9UQC9 943 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 GOLGA8MH3BSY2 632 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 NUDT21O43809 227 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 POP7O75817 140 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 MSH3P20585 1137 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 RPL10P27635 214 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 FOXN2P32314 431 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 GTF2H3Q13889 308 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 SEPT7Q16181 437 aaKnown RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 PCID2Q5JVF3 399 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 IYDQ6PHW0 289 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 XKR5Q6UX68 686 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 FAM83HQ6ZRV2 1179 aaPredicted RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 TAS2R42Q7RTR8 314 aa21.44■■□□□ 1.02
SCN1B-206ENST00000638536 ZNF761Q86XN6 746 aaPredicted RBP21.44■■□□□ 1.02
SCN1B-206ENST00000638536 DCBLD1Q8N8Z6 715 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms