RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 DNAJC16Q9Y2G8 782 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 PCDHGA7Q9Y5G6 932 aa16.53■□□□□ 0.24
CACNA1A-259ENST00000638114 OR5K4A6NMS3 321 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 STX7O15400 261 aaKnown RBP16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 GPR39O43194 453 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 DUX1O43812 170 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A9O60656 530 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 PPFIA2O75334 1257 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 ZNF189O75820 626 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 HOXB3P14651 431 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A6P19224 532 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A1P22309 533 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A4P22310 534 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 MPSTP25325 297 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 ADRA1AP35348 466 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A3P35503 534 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 ETV5P41161 510 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 CLCNKAP51800 687 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 LIMK2P53671 638 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UCNP55089 124 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 TMPRSS3P57727 454 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 GSDMDP57764 484 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 TMEM115Q12893 351 aaPredicted RBP16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 RANBP10Q6VN20 620 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 TRAPPC5Q8IUR0 188 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 OR4D9Q8NGE8 314 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 SH3KBP1Q96B97 665 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 PPP1R2P1Q96PQ5 205 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 DPYSL5Q9BPU6 564 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 TIMM29Q9BSF4 260 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A7Q9HAW7 530 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A10Q9HAW8 530 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 UGT1A8Q9HAW9 530 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 ARL5AQ9Y689 179 aa16.52■□□□□ 0.24
CACNA1A-259ENST00000638114 C2orf81A6NN90 581 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 PDZK1P1A8MUH7 402 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 HGSO14964 777 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 LPOP22079 712 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 MAPK9P45984 424 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 CFHR1Q03591 330 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 CLN3Q13286 438 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 SQSTM1Q13501 440 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 TRA2AQ13595 282 aaKnown RBP eCLIP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 ITGA9Q13797 1035 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 PTPRCAPQ14761 206 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 TAF1AQ15573 450 aaPredicted RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 SEPT7Q16181 437 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 LDLRAP1Q5SW96 308 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 ARHGEF18Q6ZSZ5 1173 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 GPR155Q7Z3F1 870 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 TRIM48Q8IWZ4 208 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 RNF10Q8N5U6 811 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 FAM71DQ8N9W8 422 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 AVL9Q8NBF6 648 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 DTX3LQ8TDB6 740 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 BRSK1Q8TDC3 778 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 LRRC45Q96CN5 670 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 HES6Q96HZ4 224 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 TSGA10Q9BZW7 698 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 ZCCHC2Q9C0B9 1178 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 CPNE5Q9HCH3 593 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM9Q9P0T7 183 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 CPNE7Q9UBL6 633 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 GUCA1BQ9UMX6 200 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 R3HDM2Q9Y2K5 976 aaKnown RBP16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 BPTFQ12830 3046 aa16.51■□□□□ 0.23
CACNA1A-259ENST00000638114 PRAMEF33A0A0G2JMD5 474 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 C5orf60A6NFR6 353 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 GAPDHSO14556 408 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 NVLO15381 856 aaKnown RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 KRT86O43790 486 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 PRAMEF10O60809 474 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 THRAP10827 490 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 CCL4P13236 92 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 VCLP18206 1134 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 KLF1Q13351 362 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 SPARCL1Q14515 664 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 SOWAHCQ53LP3 525 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 GPRC6AQ5T6X5 926 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 TMEM71Q6P5X7 295 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 DDHD1Q8NEL9 900 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 OR4K2Q8NGD2 314 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 NCSTNQ92542 709 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 USP7Q93009 1102 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 TBL1YQ9BQ87 522 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 SCHIP1Q9P0W5 487 aaPredicted RBP16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 AHCTF1Q8WYP5 2266 aa16.5■□□□□ 0.23
CACNA1A-259ENST00000638114 LOC400499M0QZD8 3231 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 TCRBV7S2A1N4TA0A589 114 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 PRAMEF1O95521 474 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 IDSP22304 550 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 RPL10P27635 214 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 AKT1P31749 480 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 CSTF2P33240 577 aaKnown RBP eCLIP16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 CA5AP35218 305 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 EPHA4P54764 986 aa16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 UBE2IP63279 158 aaKnown RBP16.49■□□□□ 0.23
CACNA1A-259ENST00000638114 SNAP47Q5SQN1 464 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms