RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 TRIM24O15164 1050 aa21.28■■□□□ 1
CLN6-224ENST00000638076 SOCS5O75159 536 aa21.28■■□□□ 1
CLN6-224ENST00000638076 TRIM25Q14258 630 aaKnown RBP21.28■■□□□ 1
CLN6-224ENST00000638076 CDKN3Q16667 212 aa21.28■■□□□ 1
CLN6-224ENST00000638076 GRAMD1BQ3KR37 738 aa21.28■■□□□ 1
CLN6-224ENST00000638076 LILRA6Q6PI73 481 aa21.28■■□□□ 1
CLN6-224ENST00000638076 SNX20Q7Z614 316 aa21.28■■□□□ 1
CLN6-224ENST00000638076 SPATA24Q86W54 205 aa21.28■■□□□ 1
CLN6-224ENST00000638076 KLHL32Q96NJ5 620 aa21.28■■□□□ 1
CLN6-224ENST00000638076 CORO1BQ9BR76 489 aa21.28■■□□□ 1
CLN6-224ENST00000638076 SLC46A2Q9BY10 475 aa21.28■■□□□ 1
CLN6-224ENST00000638076 IL26Q9NPH9 171 aa21.28■■□□□ 1
CLN6-224ENST00000638076 GIPC1O14908 333 aa21.27■■□□□ 1
CLN6-224ENST00000638076 VPS4BO75351 444 aa21.27■■□□□ 1
CLN6-224ENST00000638076 CXCL14O95715 111 aa21.27■■□□□ 1
CLN6-224ENST00000638076 UROSP10746 265 aa21.27■■□□□ 1
CLN6-224ENST00000638076 ITGB6P18564 788 aa21.27■■□□□ 1
CLN6-224ENST00000638076 CTSOP43234 321 aaPredicted RBP21.27■■□□□ 1
CLN6-224ENST00000638076 OGFRL1Q5TC84 451 aaPredicted RBP21.27■■□□□ 1
CLN6-224ENST00000638076 HACD2Q6Y1H2 254 aa21.27■■□□□ 1
CLN6-224ENST00000638076 CCDC149Q6ZUS6 474 aa21.27■■□□□ 1
CLN6-224ENST00000638076 FRA10AC1Q70Z53 315 aa21.27■■□□□ 1
CLN6-224ENST00000638076 RETREG3Q86VR2 466 aa21.27■■□□□ 1
CLN6-224ENST00000638076 ZSWIM9Q86XI8 627 aa21.27■■□□□ 1
CLN6-224ENST00000638076 ELMOD1Q8N336 334 aa21.27■■□□□ 1
CLN6-224ENST00000638076 PDLIM5Q96HC4 596 aaKnown RBP21.27■■□□□ 1
CLN6-224ENST00000638076 SLC39A3Q9BRY0 314 aa21.27■■□□□ 1
CLN6-224ENST00000638076 PCDHAC1Q9H158 963 aa21.27■■□□□ 1
CLN6-224ENST00000638076 DLGAP2Q9P1A6 1054 aa21.27■■□□□ 1
CLN6-224ENST00000638076 APPL1Q9UKG1 709 aa21.27■■□□□ 1
CLN6-224ENST00000638076 DPPA5A6NC42 116 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 PRORSD1PA6NEY8 169 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 CSPG5O95196 566 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 ITGALP20701 1170 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 STK19P49842 368 aaPredicted RBP21.27■□□□□ 0.99
CLN6-224ENST00000638076 C8orf82Q6P1X6 216 aaPredicted RBP21.27■□□□□ 0.99
CLN6-224ENST00000638076 CMTM8Q8IZV2 173 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 KREMEN2Q8NCW0 462 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 OR2AP1Q8NGE2 309 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 GCNAQ96QF7 691 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 NR1H4Q96RI1 486 aaPredicted RBP21.27■□□□□ 0.99
CLN6-224ENST00000638076 NUSAP1Q9BXS6 441 aaKnown RBP21.27■□□□□ 0.99
CLN6-224ENST00000638076 NUDT4Q9NZJ9 180 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 EPS15L1Q9UBC2 864 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 PRSS21Q9Y6M0 314 aa21.27■□□□□ 0.99
CLN6-224ENST00000638076 KIAA1671Q9BY89 1806 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 MAGEA13PA6NCF6 341 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 CAPN8A6NHC0 703 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 BBIP1A8MTZ0 92 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 PEX1O43933 1283 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 CHEK2O96017 543 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 BPIP17213 487 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 UGT1A6P19224 532 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 UGT1A1P22309 533 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 UGT1A4P22310 534 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 RPS3P23396 243 aaKnown RBP eCLIP21.26■□□□□ 0.99
CLN6-224ENST00000638076 SERPINA4P29622 427 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 UGT1A3P35503 534 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 UGT1A5P35504 534 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 RPS6KA2Q15349 733 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 VPS26BQ4G0F5 336 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 METTL3Q86U44 580 aaKnown RBP21.26■□□□□ 0.99
CLN6-224ENST00000638076 RBFAQ8N0V3 343 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 CLDN19Q8N6F1 224 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 DCBLD1Q8N8Z6 715 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 PCYOX1LQ8NBM8 494 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 ROPN1LQ96C74 230 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 PAWRQ96IZ0 340 aaKnown RBP21.26■□□□□ 0.99
CLN6-224ENST00000638076 COPS7BQ9H9Q2 264 aaPredicted RBP21.26■□□□□ 0.99
CLN6-224ENST00000638076 SDR39U1Q9NRG7 319 aaPredicted RBP21.26■□□□□ 0.99
CLN6-224ENST00000638076 TMEM181Q9P2C4 612 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 SCOCQ9UIL1 159 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 GNPTGQ9UJJ9 305 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 GLYATL1P3A0A0U1RQE8 302 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 C9JVG2 144 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 CCL16O15467 120 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 SRCP12931 536 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 ACRV1P26436 265 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 DIO3P55073 304 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 DENND4CQ5VZ89 1909 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 SCIMPQ6UWF3 145 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 GPRIN3Q6ZVF9 776 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 KLHL23Q8NBE8 558 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 LKAAEAR1Q8TD35 194 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 SLC22A17Q8WUG5 538 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 LRGUKQ96M69 825 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 C17orf80Q9BSJ5 609 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 ASAH2Q9NR71 780 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 CD300AQ9UGN4 299 aa21.26■□□□□ 0.99
CLN6-224ENST00000638076 BNIP3LO60238 219 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 OR4F21O95013 312 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 MATN4O95460 622 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 CYBBP04839 570 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 ADH1AP07327 375 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 UBTFL6P0CB48 400 aaPredicted RBP21.25■□□□□ 0.99
CLN6-224ENST00000638076 IDO1P14902 403 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 CAPN3P20807 821 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 SEMG2Q02383 582 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 ADGRE1Q14246 886 aa21.25■□□□□ 0.99
CLN6-224ENST00000638076 PITRM1Q5JRX3 1037 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms